KEGG   Malacoplasma iowae: EER00_01440
Entry
EER00_01440       CDS       T06673                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
miw  Malacoplasma iowae
Pathway
miw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:miw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EER00_01440 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:miw03400]
    EER00_01440 (uvrB)
DNA repair and recombination proteins [BR:miw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EER00_01440 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EER00_01440 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 Cas3-like_C_2 Kinesin AAA_22 AAA_7 AAA_19 PIF1 AAA_5 RNA_helicase SWI2_SNF2 Asp23 AFG1_ATPase AAA_14 DUF87 hAT-like_RNase-H AAA
Other DBs
NCBI-ProteinID: QHG89562
UniProt: A0A6P1LM40
LinkDB
Position
complement(822293..824266)
AA seq 657 aa
MKFELVSKYKPSGDQPQAIEKITDGFKNKKLKSQVLVGATGTGKTYTMANIIKNLNCKTL
VMAHNKTLAAQLYSEFKEMFPNNKVEYFVSAFDFYQPEAFLPKTNTYIEKNSQTNSDIEM
LNISALNSLTDRNDVIVVASVACIYASTPPVEFMKNKLHLVLNQKINIKELQYALVNLNY
QRNDVDVVHGKFSIKGDVVEIAPGFTDEFNIRLSFFGDEIEEIAIIEPLSKNVIRKEKDI
TICAADLYLANKDTLEESLSRIEKELQLVHQNFKDNNKLIEAQRIWERTNHDLDSFREFG
YCSGIENYSRHLELREEGQTPYTIFDFFDGDWLLIVDESHMMVPQIRGMYNTDRSRKETL
VEYGFRLPSALDNRPLNFDEFLNKINKVLYVSATPNEWEINESNGVITEQIIRPTGLVDP
IVEIRKTKDQIIDIENELNKQIAKKQRTFITVMTIRMAEELTNYLKNKNIKVAYLHNELK
TLERYKILNNLRKGIYDVVVGINLLREGLDVPEVSLVMILDADKPGFFRSDKSLIQIIGR
AARNVDGRVIMYADEITEAMKIAIDETNRRRNIQIEFNKKHNIVPKTIIKPIALDLDRSE
IELDFNRLKDKTKKGVQMRKQTIANLRKEMMEAAKKQEYERAAYLRDIIIELESNSN
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgaaatttgaattggtatcaaaatataaaccaagtggtgatcaaccacaagcaatagaa
aagattactgacggttttaaaaataaaaaacttaaatcacaagttttagttggtgctact
ggaacaggtaaaacttatacaatggctaacatcattaaaaatttaaattgtaaaacccta
gtaatggcacacaataaaacacttgctgctcaactttattctgaatttaaagagatgttt
ccaaataataaagttgaatattttgtatccgctttcgacttttatcaaccagaagctttt
ttgccaaaaactaatacatatattgaaaaaaattcacaaaccaattcagatatagaaatg
cttaatatatcagctcttaattcacttacagatcgtaatgatgtaatagttgttgcaagt
gttgcttgtatttatgcttcaactcctccagttgaatttatgaaaaataaattgcattta
gttcttaatcaaaaaattaatattaaagaattacaatatgcacttgttaatttaaattat
caaagaaatgatgttgatgttgttcatgggaagtttagtattaagggagatgtggttgaa
attgctccaggttttactgatgaatttaacattcgtttatctttttttggtgatgaaatt
gaagaaattgcaatcatagaacctttatcaaaaaatgttattagaaaagaaaaagatata
actatttgtgcagctgatttatatttagctaataaagatactcttgaagaatctttatca
agaatcgaaaaagaattgcaactagttcatcaaaattttaaagataataataaattaatt
gaagcacaaagaatatgggaaagaacaaatcacgatttagactcttttagagagtttgga
tattgttctggaattgaaaattattcaagacatcttgaattaagagaagagggacaaaca
ccttatacaatatttgatttttttgatggtgattgattgttaattgttgatgaatctcat
atgatggttccacaaatcagaggaatgtataatactgatagaagcagaaaagaaacactt
gtagaatatggatttagacttccgagtgctttagataatagaccacttaactttgatgaa
tttttaaataagataaataaagttctatatgttagtgcaacgcctaatgaatgagaaatt
aatgaatcaaatggagttattactgaacaaattattagaccaacaggtcttgttgatcca
atagttgaaataagaaaaactaaagatcaaataattgatattgaaaatgaattaaacaaa
caaattgcaaaaaaacaaagaacatttattactgtcatgacaataagaatggctgaagaa
ttaacaaattatttaaaaaacaaaaacataaaagtagcataccttcacaatgaattaaaa
acattagagcgttataaaatcttaaataatttaagaaaaggcatttatgatgttgttgtt
ggaattaatttgttaagggaagggttagatgttccagaagtttcattggtgatgatatta
gatgctgataaacccggtttttttagaagtgataagtcattaatccaaattataggaaga
gctgctagaaatgttgatggtagagttattatgtatgctgacgaaattacagaagctatg
aaaattgcaattgatgaaacaaatagaagaagaaatattcaaattgagtttaataaaaaa
cataatattgttccaaaaactattattaaaccaattgcactagatcttgatagatctgaa
atagaattggactttaatagattaaaagataaaactaaaaaaggtgtgcaaatgagaaaa
caaacaattgctaaccttagaaaagaaatgatggaagcagcaaaaaaacaagaatatgaa
agagcagcttatttaagagatattattattgagcttgaatcaaatagtaattaa

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