Malacoplasma iowae: EER00_02380
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Entry
EER00_02380 CDS
T06673
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
miw
Malacoplasma iowae
Brite
KEGG Orthology (KO) [BR:
miw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miw03019
]
EER00_02380
03009 Ribosome biogenesis [BR:
miw03009
]
EER00_02380
Enzymes [BR:
miw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EER00_02380
Messenger RNA biogenesis [BR:
miw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EER00_02380
Ribosome biogenesis [BR:
miw03009
]
Prokaryotic type
rRNA helicases
EER00_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
DUF1699
PhoH
Motif
Other DBs
NCBI-ProteinID:
QHG89732
UniProt:
A0A6P1LMI4
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All DBs
Position
1053538..1054914
Genome browser
AA seq
458 aa
AA seq
DB search
MERFFKNEWLNQAIADLNIKRYTDIQFKTIPSILKNNNTIGVSETGTGKTYAYLFPILEK
IDTSLNYIQSIIILPTRELANQIYSKSIYFKKYNKNLKIKLLVGGSETETINKKIENNPP
HILITTPQKFQELNSNFKLILTNLKYIVLDEADMLIDLGFFGLIESIFNSIKNINDITKV
AFSATLHEKLSIQLSKYFKNSKIFDVTTNIWTHKKINHHVIHYGNNDKIEVLKKLLEKTN
PYFCIIFANTKKDVDQIFDVLVQIEPNNIAKLHGDLTSRERKNTYKAIQANLFKYLVATD
LASRGLDIDGASHIISYNMPKEDIWYIHRAGRSGRYNYIGNSYVFLDENNYYAITRLQKK
GIVWNNIKFNKNEFSEFNYKFKKVEKKETEVDVQIRKVISTASKKVKPNYKKKVKLQIQE
IKRKAKRKRIEELVNEQRIKKYKMENAAKSRNKKNKGQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattttttaaaaacgaatggttaaatcaagcaatagctgatcttaacataaaa
agatatacagatattcaatttaaaacaattccatccattttaaaaaacaataatactatt
ggtgtatcagaaactggtactggtaaaacatatgcttatctttttcctattttggaaaaa
atagacacatcattaaactacattcaatcaattattattttgccaactagagaattagct
aatcaaatttacagcaagtcaatttattttaaaaaatacaacaaaaacttaaaaattaag
ctacttgtgggtggttctgaaacagaaacaataaataaaaaaatcgaaaataatcctcca
cacatattaataacaacaccacaaaaatttcaagaattaaattctaactttaagttaatt
ttaaccaacttaaaatatattgttttagatgaagctgatatgctaattgatctaggtttt
tttggtttgattgaatcaatatttaattcaataaaaaatattaatgacataacaaaggta
gctttttctgcaacacttcacgaaaaattaagtatccaattatctaaatatttcaaaaat
tcaaaaatatttgatgtaacaacaaatatttgaacacataaaaaaattaatcatcatgta
attcattatgggaataatgacaaaatagaagtattaaaaaaactgctggaaaaaactaac
ccatatttttgtataatatttgctaatacaaaaaaagatgttgatcaaatatttgatgtt
ttagttcaaatcgaacctaataatattgctaaacttcatggtgacctaacatcaagggaa
agaaaaaacacatacaaagcaattcaagcaaatttatttaaatatttagttgcaactgat
ttagcatctagaggattagacattgatggtgctagccatattatttcttataatatgcca
aaagaagatatatggtacattcatagagcaggtagaagtggaagatataactacattggt
aattcatatgtatttttagatgaaaacaattattatgctattacaagacttcaaaaaaag
ggaatagtttgaaacaatattaaatttaataaaaatgaatttagtgaatttaattataaa
tttaaaaaagtagaaaaaaaagaaacagaagtagatgttcaaattagaaaagtaataagt
acagcatctaaaaaagtaaaaccaaattataaaaagaaagttaaacttcaaattcaagaa
attaaaagaaaagctaaaagaaaaagaattgaagaactagttaatgagcaaagaataaaa
aaatataaaatggaaaatgctgctaaatctagaaacaaaaaaaataaaggacaataa
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