Methylocystis iwaonis: SS37A_02520
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Entry
SS37A_02520 CDS
T09113
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
miwa
Methylocystis iwaonis
Pathway
miwa02020
Two-component system
miwa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SS37A_02520 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SS37A_02520 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miwa03021
]
SS37A_02520 (rpoN2)
Transcription machinery [BR:
miwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SS37A_02520 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_AraC
HTH_Crp_2
HTH_38
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
BDV32723
LinkDB
All DBs
Position
complement(263172..264761)
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AA seq
529 aa
AA seq
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MAISTKLMMRQGQALVMTPQLLQAIKLLQFSNLELSAFLHDELERNPLLEAQEGDYADGP
AAEREASHSDDFRAESQGEADHFGAEPHEGDWARDSLAVDSATLSSDLGADLSNTFDPEG
PAVTAQAPREALEGAGLSATSWSGSAGGGGDDGEAPNLEAYVASRPSLHEHLAEQLALVC
PEPGRRMIGQAIIDGIDETGYLREAIEEIADRLGAGLAETEAVLAAIQSFEPSGVGARDL
AECLAIQLKERDRYDPAMQIFVANLALVAKRDFAQLAKLCGVDGEDIADMAAELRSLDPK
PGRAFGDSPIQPLVADVIVRAAPDGSWHVELNSDALPRVLVNHSYAAKVSAGARDGDKTF
ISTCLQNANWLTKSLEQRSRTILKVASEIVRLQDAFLAKGVEHLRPLNLRTIADAIGMHE
STVSRVTSNKYMMTPRGIFELKYFFSASIATTSGAEAHSAESVRFRIKQMIDRETADDVL
SDDAIVAKLKAIDIDIARRTVAKYRDSLRIPSSVDRRRAKMAMAREQVH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcgaccaagctgatgatgcgtcagggccaagccctggtgatgaccccgcag
ctcttgcaagcgatcaagctgctgcaattttccaatctggagctttccgcctttttgcat
gacgagctcgagcgcaaccccctgctcgaggcgcaggaaggcgactacgccgacggtcca
gccgcggagcgcgaggcgagccattccgacgatttccgcgcggaatcgcagggcgaagcg
gatcatttcggcgcggagcctcacgagggcgattgggcccgcgattcgctcgcggtcgat
tccgcgacgctttcctccgatctcggcgccgatttgagcaacactttcgacccggagggc
ccggcggtgacagcccaggcgccgcgcgaggcgctggagggcgcgggcctgtccgcgact
tcctggagcggctccgccggcggcgggggcgacgatggcgaggcgcccaatctcgaggct
tatgtcgcgtcccgccccagcctgcacgagcatctcgccgaacagctcgcgctcgtttgc
cccgagcccggccggcggatgatcggtcaggcgatcatcgacggcatcgacgagaccggc
tatctgcgcgaagcgatcgaggagattgcagacaggctcggcgcgggcctcgccgaaacc
gaggcggtgctcgcggcgatccagagtttcgagccatccggggtgggcgcccgcgatctc
gccgaatgcctggcgattcagctcaaggagcgcgatcgctacgatccggcgatgcagatt
ttcgtcgctaatctggcccttgtcgccaagcgcgatttcgctcagctcgccaagctctgc
ggcgtcgacggcgaggacatcgccgacatggccgccgagctgcgcagcctcgaccccaag
cccggtcgcgcctttggcgattcgccgatccagccgctcgtcgccgacgtcatcgtgcgc
gcggcccctgacggctcatggcatgtggagctgaattccgacgcgctgccgagagtgctc
gtcaatcacagctatgcggcgaaggtcagcgccggggcgcgcgacggcgacaagaccttc
atctccacctgcctgcagaacgccaattggctgacgaaaagcctggagcagcgcagccgg
accattttgaaagtcgcctcggagatcgtccggctgcaggacgcttttctcgccaaaggc
gtggaacatttgcggccgctcaatctgcgcactatcgccgacgcgatcggcatgcacgag
tcgaccgtctctcgcgtcacctcgaataaatatatgatgacgccgcgcggcatcttcgag
ctcaaatatttcttctcggcctctatcgcgacgaccagcggcgcggaggcgcattcggcc
gaatccgtgcgattccgcatcaagcagatgatcgacagggagaccgccgacgacgtgctc
tccgacgacgccatcgtcgccaagctgaaggcgatcgacatcgacatcgcccggcgcacc
gtcgccaaatatcgcgatagcctgcgcattccttcttcggtcgaccgccgccgggcgaaa
atggcgatggcgcgcgagcaagttcattga
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