Methylocystis iwaonis: SS37A_04610
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Entry
SS37A_04610 CDS
T09113
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa00061
Fatty acid biosynthesis
miwa00071
Fatty acid degradation
miwa01100
Metabolic pathways
miwa01212
Fatty acid metabolism
miwa02024
Quorum sensing
miwa04146
Peroxisome
Module
miwa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SS37A_04610 (fadD)
00071 Fatty acid degradation
SS37A_04610 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SS37A_04610 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SS37A_04610 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
miwa01004
]
SS37A_04610 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
miwa04147
]
SS37A_04610 (fadD)
Enzymes [BR:
miwa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SS37A_04610 (fadD)
Lipid biosynthesis proteins [BR:
miwa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SS37A_04610 (fadD)
Exosome [BR:
miwa04147
]
Exosomal proteins
Exosomal proteins of breast milk
SS37A_04610 (fadD)
Exosomal proteins of breast cancer cells
SS37A_04610 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BDV32932
LinkDB
All DBs
Position
complement(483669..485399)
Genome browser
AA seq
576 aa
AA seq
DB search
MTSPEQQHDPYATRPWLASYPAGVPATIDPGRSTLVDLLRKSAAAYADRPAMESFGARLS
YRELTRAAEAVASWLQRQGLEKGDRVAIMSPNVLAYPAILFGVLLAGGVVVNVNPLYTPS
ELEFQINDAGARFLFVFENFAHTAQAAWPRMKVERAIIVAPGDLMGLKGFLVNFVSRQIK
RAVPAYAIAESLSFAEVLREGGKRPFTPAQIAPEDVAFLQYTGGTTGVAKGAILLHRNVA
ANVEQTWAWLDSYLGPTGPHVMVTALPLYHIFALTACCMLTMRAGGCCLLIANPRDLKGL
IATVRNARFTVFSGVNTLYAALADHPRIRDVDFSNLKMSISGGMSTQQVVAQKWKAISGK
PIVEGYGLSETSPILTVNRADIAEFTGAIGYPLPSTEITLRDEHGDAAPFGERGELWARG
PQVTPGYWRRPDETAKAMTSDGFFKTGDVAVMQPDGMFKIVDRLKDIILVSGFNVYPNEV
EAALAEHPKVKEVAVIGVPFAHSGEAPMAFVTARDPSLTADELRRFAHERLTGYKVPRFY
EFRDSLPKTNVGKILRRALRDEYFARPKAPANEEQA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcccagagcaacagcacgacccctatgcgacgcggccctggctcgcttcctat
ccggcgggcgttccggccacgatcgacccaggccgttcgaccctcgtcgatctcctgcgc
aaaagcgccgccgcctatgccgatcgccccgcgatggaaagcttcggcgcacggctcagc
tatcgcgaattgacccgcgccgccgaagccgtcgcgtcctggctgcaaagacaagggctg
gagaaaggcgatcgcgtcgcgatcatgtcgcccaatgttctcgcctatccggcgatcctc
ttcggcgttttattggcgggcggcgtggtcgtgaacgtcaatccgctctatacgccgagc
gaactcgaattccagatcaacgacgcgggcgcgcgtttcctcttcgttttcgaaaatttc
gcacataccgcgcaagccgcctggccgcgcatgaaagtcgaacgggcgatcatcgtcgcg
cccggcgatctcatggggctgaaaggcttcctggtgaatttcgtctcgcggcagatcaag
cgggcggttcccgcctatgcaattgcggaaagcctgtccttcgccgaggttttgcgcgaa
ggcggcaagcgtccgttcacgccggcccaaatcgcgcccgaggacgtcgcctttctgcaa
tatacgggcggcaccaccggcgtggccaagggcgcaattttgctccaccgcaacgtcgcc
gccaatgtcgagcagacctgggcctggctcgactcctatctcgggccgaccggcccgcat
gtgatggtgacggcgctgccgctctaccacatcttcgcgctcacggcctgctgcatgctg
acgatgcgggcgggcggctgctgcctgctcatcgccaatccgcgcgacctcaaggggctt
atcgcgacggtgcgcaacgcccgcttcaccgtcttctcgggcgtgaacaccctctatgca
gctctcgccgatcacccgcgtatcagggatgtcgatttctccaatctcaagatgagcatc
tccggcggcatgtcgacacagcaggtcgtcgcgcaaaaatggaaggcgataagcggaaaa
ccgatcgtcgaaggctacggcctctccgagacgtcgccgatcctgaccgtcaaccgcgca
gacattgcggagttcaccggcgccatcggctacccccttccctcgaccgagattacgctg
cgcgacgagcatggcgacgcggcgccctttggcgagcgcggcgagctctgggcgcgcggc
ccgcaggtgacgccgggctattggcgccgccccgacgagaccgccaaggccatgacctcc
gacggcttcttcaagacgggcgacgtcgccgtcatgcagccggacggcatgttcaagatc
gtcgatcgcctgaaggacattattctcgtctcgggattcaacgtctatcccaatgaggtg
gaggcggcgctcgccgaacacccgaaggtgaaggaagtcgccgtcatcggcgtgcccttc
gcccattccggcgaagcgcccatggccttcgtcacggcacgcgatccgagccttacagcc
gacgagctgcgccgcttcgcccatgagcgactcaccggctacaaggtgccgcgcttctac
gagtttcgtgattccttgccgaaaaccaatgtggggaagattttgcgccgcgcgctgcgc
gacgaatatttcgcgcggcccaaggcgcctgccaatgaggagcaggcgtag
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