Methylocystis iwaonis: SS37A_06130
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Entry
SS37A_06130 CDS
T09113
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03420
Nucleotide excision repair
miwa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SS37A_06130 (pcrA)
03430 Mismatch repair
SS37A_06130 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_06130 (pcrA)
Enzymes [BR:
miwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SS37A_06130 (pcrA)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SS37A_06130 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SS37A_06130 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BDV33084
LinkDB
All DBs
Position
complement(652964..655297)
Genome browser
AA seq
777 aa
AA seq
DB search
MTDFDDYAPQAGGLAARAAAAAQRPRYLDGLNPEQRAAVETLDGPVLVLAGAGTGKTRAL
TTRIAHIMALGQARAYEILAVTFTNKAAREMRERVEMLVGDGAQAMQWLGTFHAISAKIL
RRHAELVGLKPNFTILDTDDQIRLLKQVLQAENIDDKRWPARALAMRIDGWKNRGLLPAQ
VPAGEAESFANGKGGALYALYQERLKILNAVDFGDLLLETLRLFRENPDVLADYQKRFKY
ILVDEYQDTNVAQYLWLRLISQGRRNVCCVGDDDQSVYGWRGAEVENILRFEQDFPGAKI
VRLERNYRSTGHILAAASHLIAHNEGRLGKTLFTDGEEGEKPTLTGVWDSQEEARVIGED
IEQLQRKGHSLEEIAILVRASFQMREFEERFVEIGLPYRIIGGPRFYERAEIRDALAYLR
CVGQPSDDLAFERIINTPKRGLGDATVQLLHEYGRRERIPLMQAARFLVETEELKPKPRG
ALKSLVADFERWRNLIDSKPQHELAEMVLDESGYTQMWRDDKTPEAAGRLENLKELVRAM
EEFPDLAAFLEHVSLVMETEESKEQARVSVMTLHAAKGLEFETVYLPGWEEGLFPHQRSL
DEQGRAGLEEERRLAYVGVTRAKRRARIFFASNRRIRGLWQPTVPSRFVDNLPSDHVEVV
EAPSASQYGGYAVSRFANLDVYGSDYSTPGWKRAKAGATTPRAEPMRESRPRAKQPMTIE
GEVVARSSTNARYGAGSRVFHLKFGPGTVAAVDGNKCTVDFDKAGRKMVLESFLQAG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatttcgacgattacgcgccgcaagccggcgggctcgccgcccgcgccgccgcg
gcggcgcaacggccgcgctatctcgacggtctcaaccccgagcagcgcgccgcggtcgaa
acgctcgacggccccgtgctcgtccttgccggcgccggcaccggcaagacccgcgcgctc
accacgcgcatcgcgcatatcatggcgctgggccaggcgcgcgcctatgagatcctcgcc
gtcaccttcaccaacaaagcggcgcgcgagatgcgcgagcgcgtcgaaatgctcgtcggc
gacggcgcgcaggccatgcaatggctcggcacctttcacgccatcagcgcgaaaattctg
cgccgccacgccgagcttgtcggactgaagcccaatttcaccattctcgacacggacgac
cagatccgcctgctcaagcaggtgttgcaggccgaaaacatcgacgacaagcgctggccc
gcccgcgcgctcgccatgcgcatcgacggctggaagaatcgcggccttctgccggcgcaa
gttccggcgggcgaggccgagagtttcgccaatggcaaaggcggcgcgctttacgcgctc
tatcaggagcgcctcaaaatcctcaacgccgtcgatttcggcgatctgctgctcgagacg
ctgcggctctttcgcgagaaccccgacgtgctcgcggattaccagaagcgcttcaaatat
attctcgtcgacgaatatcaggacaccaacgtcgcgcaatatctctggctgcggctcatc
tcgcaggggcgccgcaatgtctgttgcgtcggcgacgacgatcaaagcgtctatggctgg
cgcggcgcggaggtcgaaaacatcctgcgcttcgagcaggacttccccggcgccaagatt
gtgcggctcgaacgcaactaccgctcgacagggcacattctcgccgccgcctcgcatctg
atcgcgcacaatgaagggcgcctcggcaagacgctgttcaccgatggcgaagagggcgag
aagccgacgctcaccggcgtctgggacagccaggaggaagcccgcgtcatcggcgaggac
atcgagcaattgcagcgcaagggccattcgctcgaagagatcgccattctcgtgcgcgcc
tccttccagatgcgcgagttcgaagagcgcttcgttgagatcggactgccctatcgcatt
atcggcggcccgcgcttctatgagcgcgccgaaatccgcgacgcgctcgcttaccttcgc
tgcgtcgggcagccttccgacgatctcgccttcgagcgcatcatcaatacgcccaagcgc
ggcctcggcgacgcgaccgtgcaattgctgcacgaatatggacggcgcgagcgcattccg
ctgatgcaggcggcgcgttttctcgtcgagacggaggagctgaagcccaagccgcgcggc
gcgttgaaaagcctcgtggcggatttcgagcgctggcgcaatctgatcgattcgaagccg
cagcacgagctcgccgaaatggtgctggatgaatccggctacacgcaaatgtggcgcgac
gacaagacgccggaagccgccgggaggctcgaaaacctgaaagaactcgtgcgcgcgatg
gaggaatttcccgacctcgccgcctttctcgagcatgtttcgctcgtcatggaaaccgag
gaaagcaaggagcaggcgcgcgtctcggtgatgacgctacacgccgcgaagggcctcgaa
ttcgagaccgtctatctgccgggatgggaggaagggctctttccgcatcagcgctcgctc
gacgagcagggccgcgcgggattggaggaggagcgccgcctcgcctatgttggcgtcacg
cgcgcgaaacgccgggcgcgcatatttttcgcgagcaaccgccgcattcgggggttatgg
caaccgacagtgccgtcacgcttcgtcgataatctgccctcggaccatgtcgaagtggtc
gaggcgccgagcgcctcgcaatatggcggctatgcggtctcgcgcttcgccaatctcgat
gtctatggctcggattattcgacgccaggctggaagcgcgccaaggcgggcgccacgacg
ccgcgcgccgagccgatgcgcgagtcgcgcccgcgcgccaaacagccgatgacgatcgaa
ggcgaggtcgtcgcccgctcatcgaccaatgcgcgatatggcgcggggtcgcgggtgttt
catttgaagtttgggccgggcacggtcgcagcggtggatgggaataagtgcaccgtggat
ttcgacaaggccgggcggaagatggtgctggagagttttctccaggcggggtag
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