Methylocystis iwaonis: SS37A_09550
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Entry
SS37A_09550 CDS
T09113
Symbol
rpoH2
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
miwa
Methylocystis iwaonis
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miwa03021
]
SS37A_09550 (rpoH2)
Transcription machinery [BR:
miwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SS37A_09550 (rpoH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_3
HTH_11
HTH_19
KORA
Sigma70_r3
Sigma70_r4_2
GntR
LysM
Motif
Other DBs
NCBI-ProteinID:
BDV33426
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All DBs
Position
1009404..1010288
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AA seq
294 aa
AA seq
DB search
MANTLPIVAEGGLARYLAEIRRFPMLEPQQEYMLAKRWREHEDPKAAHALVTSHLRLVAK
IAMGYRGYGLPIGEIVSEGNVGLMQAVKRFEPDRGFRLATYAMWWIRASIQEYILRSWSL
VKMGTTASQKKLFFNLRKAKSRISAFEEGDLRPENVEKIATRLGVSQQDVIEMNRRMGGD
ASLNAPLREEGEGEWQDWLVDESDDQERILAAQEESNNRLKALRGALDVLNPRERRIFEA
RRLADDPVTLEALSEEFGVSRERVRQIEVRAFEKVQAAVKTGVARIEETHAAAM
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatactttgcccatcgtcgcggaaggcgggctcgcccgttaccttgccgaaatc
cgccggttcccgatgctggagccgcagcaggaatatatgctcgccaagcgttggcgcgaa
catgaagacccgaaggccgctcacgcgcttgtcacctcgcatctgcgcctcgtggccaag
atcgccatgggctatcgcggctacggcctgccgatcggcgagatcgtctcggagggcaat
gtcggcctgatgcaggccgtcaagcgcttcgagccggaccgcggcttccgcctcgctacc
tatgcgatgtggtggatccgcgcctcgattcaagaatacatcctgcgctcctggtcgctc
gtgaaaatgggcacgacggcgagccagaagaagctcttcttcaatctgcgcaaggccaag
agccgcatctccgctttcgaggagggcgatctgcggcccgagaatgtcgagaagatcgcg
acgcgtctcggcgtctcgcagcaggacgtgatcgagatgaaccgccgcatgggcggcgac
gcctcgctcaacgccccgctgcgggaggagggcgaaggcgaatggcaggactggctcgtc
gacgagagcgacgaccaggagcgcattctcgccgcgcaggaggagagcaacaatcgcttg
aaggcgttgcgcggcgcgctcgacgtgctcaacccgcgcgaacgccgcatcttcgaggcg
cgccgcctcgccgacgatccggtgacgctcgaggcgctttccgaagaattcggcgtctcc
cgcgagcgcgtccgccagatcgaggtccgcgccttcgagaaagtgcaggcggcggtgaag
accggcgtggcgcggatcgaagagacgcacgccgcggcgatgtga
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