Methylocystis iwaonis: SS37A_15910
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Entry
SS37A_15910 CDS
T09113
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS37A_15910 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miwa03019
]
SS37A_15910 (groL)
03110 Chaperones and folding catalysts [BR:
miwa03110
]
SS37A_15910 (groL)
03029 Mitochondrial biogenesis [BR:
miwa03029
]
SS37A_15910 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
miwa04147
]
SS37A_15910 (groL)
Enzymes [BR:
miwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SS37A_15910 (groL)
Messenger RNA biogenesis [BR:
miwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SS37A_15910 (groL)
Chaperones and folding catalysts [BR:
miwa03110
]
Heat shock proteins
HSP60 / Chaperonin
SS37A_15910 (groL)
Mitochondrial biogenesis [BR:
miwa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SS37A_15910 (groL)
Exosome [BR:
miwa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SS37A_15910 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SS37A_15910 (groL)
Exosomal proteins of breast cancer cells
SS37A_15910 (groL)
Exosomal proteins of colorectal cancer cells
SS37A_15910 (groL)
Exosomal proteins of bladder cancer cells
SS37A_15910 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDV34062
LinkDB
All DBs
Position
1684805..1686487
Genome browser
AA seq
560 aa
AA seq
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MARHIGFGDPVRMKLLDGVNTLADAVGVTLGPRGRNVVIEHRAAGLPPVATKDGVTVAQA
IELSGRTESVGVSLVRQMATTVAKEAGDGTTTSVVLTRRIAIETRKALAAGFNPRDLAIG
MERAARAVDSELTRRARPCADVRSLAHVATLAAAGDESIGAIVAEALRQAGEGGLVDVEL
GSALQDEIEAVEGMRWAQGYRSPYFMTDSTRKLAELEDAYVLVYDRVINDFAELLPALEL
VRRRKGALLVVAENIAEEALPGLLLNHIRKNLCSIAVKGPGYGDNRYEYLLDLAALTGGR
AIMEAFGEELSSVTMEHLGRARRVIVSEDETVVIGAGGDPALIADRLASARRQAERITGG
DASKGSPSGKRHDLENLHARIQALTGKVVTIKAGGFSDILIKERMQRIENALNSARAARD
EGVVAGGGVALYRARAALANLQGDTLDESHGIAIIREALDEPIRRIAGNAGVDVNELLFE
LKRTDDDFWGMDMRSGAYGDLYAAGVIDPARVSRLALRNAIATASSLMTVECAVTHVSPS
DPTFGFDPHLAAQTREDPRS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagacatattggttttggcgatcccgtacgcatgaaattgctcgacggcgtaaat
actcttgcggacgcagtgggcgtcacgctcggcccgcgcggccgtaacgtcgtcatcgag
catcgagccgcgggcttgccgccggtcgcgacgaaggacggcgtgacggtcgcgcaggcg
atcgaattgtcgggcaggacggagagcgtcggcgtgtcgctcgtgcggcagatggcgacg
acggtggcgaaagaggccggggacggcacgaccacctccgttgtgctgacgcggcgcatc
gccatcgagacgcgaaaggcgctcgccgccggattcaatccgcgtgatctcgcgatcggc
atggagcgcgccgcgcgcgccgtcgactcagagctcacgcggcgcgcgcggccctgcgcc
gacgtgcggtcgctcgcacatgtcgcgacgctcgcggcggcgggcgacgaatcgatcggc
gccattgtcgccgaagcgctccggcaggccggcgagggcggactcgtggacgtcgagttg
gggagcgcgctccaagacgagatcgaggcggtcgaaggcatgcgatgggcgcagggttat
cgctcgccctatttcatgaccgacagcacgcgcaagctcgccgagctcgaagacgcttat
gtcctcgtctatgatcgcgtgataaatgatttcgccgaactcctgccagcgctcgagttg
gtgcgccggcgcaagggcgccctgctcgtcgtcgcggaaaacattgccgaagaggcgctc
ccgggcctgctgctcaatcatattcgcaagaacctctgctccatcgcggtcaaaggtccg
ggctacggcgacaatcgttacgaatatctgctcgatcttgccgctttgacgggcgggcga
gcgatcatggaggcgttcggcgaagaactctccagcgtcacgatggagcatctgggccgc
gcgcggcgtgtcattgtcagcgaggacgaaacagtcgtgatcggcgccggaggagacccg
gctttgatcgccgaccgtctcgcctccgcgcgacggcaagcggagcggattaccggcggc
gacgcatccaaaggctcgcctagcgggaagcgacacgacctcgagaatttacacgccaga
atccaggcgctcaccggcaaggtcgtcacgatcaaagccggcggcttctctgatattctc
atcaaggagcgtatgcagcgcatcgagaatgcgttgaactcggcgcgcgcggcgcgcgac
gaaggcgtcgtcgccgggggtggcgtcgcgctgtatcgcgcccgcgcggcgctcgccaat
cttcaaggcgacactctcgatgagagccacggcatcgccatcatacgcgaagcgctcgac
gagcccatacgccgtatcgccggcaacgccggcgtcgacgtcaatgaattgctgttcgaa
ctcaaacgaaccgatgacgacttctggggaatggacatgcgcagcggcgcctatggcgac
ctttatgctgcgggcgtgatcgatcctgcgcgcgtctcacgtctcgcgctccgcaacgcc
atcgcaacggcgtcatccttaatgacagtcgaatgcgcggtcacgcatgtctccccgagt
gatccgacgttcggcttcgatccgcatctcgccgcgcagacgagagaagatccgcggtcc
tga
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