Methylocystis iwaonis: SS37A_16840
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Entry
SS37A_16840 CDS
T09113
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
miwa
Methylocystis iwaonis
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
miwa03016
]
SS37A_16840 (rnd)
Enzymes [BR:
miwa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SS37A_16840 (rnd)
Transfer RNA biogenesis [BR:
miwa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SS37A_16840 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDV34155
LinkDB
All DBs
Position
complement(1784424..1785638)
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AA seq
404 aa
AA seq
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MSLLTTTDELAAVCDRFSRHPFVTVDTEFLRETTFWPKVCVIQIASPEEAVAIDALADSV
DLSPFFELMANPEVVKVFHAARQDLEIIWRLARLIPAPLFDTQVAAMVCGFGEQASYLEL
VKAITRANLDKSSRFTDWSRRPLSAAQIEYAIADVTHLRDIYLSLRARLERSNRLDWLAD
EMQTLTSPATYEQHPENAWERLRHRARKPRDLAVLMELAAWRESEAQSRDVPRSRVLKDD
MLIEIAQSAPRSPEALANLRSFPKGMERSRAGADIVAAVERGLARDPASVPRIERERRGS
NGATVELLKVLLRQVTEQTGVAAKMIATVEDLEAIAADDRADVQALKGWRRAIFGEKALE
LKSGRLALAIENGRVVTFDWQDAGEAPAQAEASAETREEASASG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagccttctaaccactaccgacgaactcgcagccgtctgcgaccgcttttcgcgtcac
cccttcgtgactgtcgacacagagtttctgcgcgagacgaccttctggccgaaagtctgc
gtcatccaaatcgcttcgcccgaggaggccgtcgccatcgacgcgcttgccgacagcgtc
gacctctcgcccttcttcgagttgatggcgaaccccgaggtcgtcaaagtgttccatgcc
gcgcggcaggacctcgagattatctggcggctcgcgcgcctcattccggcgccgctcttc
gacacccaggtcgccgccatggtctgcggcttcggcgagcaggcctcctacctcgagctc
gtcaaggcgatcacccgggccaatctcgacaaatcctcgcgcttcaccgattggtcgcgc
cggccgctctcggccgcgcagatcgaatatgcgatcgccgacgtcacccatctgcgcgac
atctacctctcgctgcgggcccggctcgaacgctcgaaccggctcgactggctcgccgac
gagatgcaaacgctcacctcgcccgcgacctatgagcagcatcccgagaacgcctgggag
cggctgcgtcaccgcgcccgcaagccgcgcgatctcgccgtgctgatggagctcgccgcc
tggcgcgagtccgaggcgcagagccgcgacgtgccgcgctcgcgcgtcctcaaggacgac
atgctgatcgagatcgcgcaatcggccccgcgcagccccgaggcgctcgccaatctgcgc
tctttccccaaggggatggagcgttcgcgcgccggcgccgacatcgtcgccgccgtcgaa
cgcggcctcgcccgcgatcctgcgagcgttccgcgcatcgagcgcgagcggcgcggctcg
aacggcgcgacggtcgagctgctgaaggttctgctgcgccaggtgacggagcagaccggc
gtcgccgccaaaatgatcgccacggtcgaagacctcgaggcgatcgccgctgacgaccgc
gccgacgtgcaagcgctgaagggctggcggcgggccattttcggcgaaaaggcgctggag
ctgaaaagcggccgactcgcgctcgccatcgagaacggcagggtcgtcaccttcgattgg
caggacgccggcgaagcccccgcgcaggcggaagcctcggctgaaacgcgcgaagaagct
tccgcctcgggctga
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