Methylocystis iwaonis: SS37A_21930
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Entry
SS37A_21930 CDS
T09113
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SS37A_21930 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_21930 (uvrB)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SS37A_21930 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SS37A_21930 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
AAA_30
SWI2_SNF2
Microtub_bd
Kinesin
DUF2963
Motif
Other DBs
NCBI-ProteinID:
BDV34664
UniProt:
A0ABN6VG45
LinkDB
All DBs
Position
complement(2281240..2283813)
Genome browser
AA seq
857 aa
AA seq
DB search
MATSPEKPKKTAPKKDPARPTRAKASKPELAPLAPHLAQLLNPALAPGFSDMGQAAYDAD
GAPVDDEEVQKWFLGPQPPSGGGVQATSDSLAELLRLGDPNLRGAKPWVPHRPERPAKSE
GGVKFELVSEYTPKGDQPAAIDELVKGIQANERDQVLLGVTGSGKTFTMASVISATQRPA
LILAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSVNEQID
RMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFSVQLGEKLEPKQLVTDLVALH
YRRVQADFTRGTFRVRGDTIDIFPAHYEDRAWRISFFGDEVESISEFDPLTGKKTVDLEF
VKVYANSHYVTPRPTLLQSIKAIKDELKHRLDELNRSGRLLEAQRLEQRTRFDLEMMEAT
GACAGIENYSRYLTGRKPGEPPPTLFEYLPDNALVFADESHVSVPQIGAMYKGDFRRKAT
LAEYGFRLPSCMDNRPLRFEEWDAMRPQTVSVSATPGNWELEQTGGVFVEQVIRPTGLID
PPVEIRSARTQVDDLLDEVRATSDIGYRTLVTVLTKRMAEDLTEYLHESGVRVRYMHSDI
DTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIG
RAARNVDGRVILYADHITGSMKRAMDETDRRRAKQVAYNLENNITPASIKRGIADILGSV
AEQDHVTVDTGYDIAPGHNLAATIADLEKRMKEAAADLAFEEAARLRDEIQRLQKAELLA
EASPMLRISLSRQARAGAPRDGEGLATRARKPTDADMGPHNFGGGEARPVGRMPPARPAG
RSSGGKPGTRTLKGKPK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctcccgagaaacccaagaaaaccgcccccaagaaagaccccgcgcgcccc
acccgcgccaaggcgtcgaagcccgagctggcgccgcttgcgccgcatctggcgcaattg
ctcaatccggcgctggcgcccggcttcagcgatatggggcaggcggcctatgacgcggat
ggcgcgccggtcgacgacgaagaggtccagaagtggtttctggggccccagccgccgtcc
ggcgggggcgtgcaggccacctcggactcgctggccgaactgctgcgcctcggcgacccc
aatctgcgcggcgccaagccctgggttccgcaccgccccgagcggccggcgaaatccgag
ggcggcgtcaaattcgagctcgtctccgaatatacgcccaagggcgaccagccggcggcc
atcgacgagttggtgaagggcattcaagccaatgagcgcgatcaggtgctgctcggcgtc
accggctcgggcaagaccttcaccatggccagcgtcatctccgcgacgcagcgcccggcg
ctgatccttgcgcccaacaagacgctggcggcgcagctatatggcgagttcaagagcttc
tttccgaacaacgccgtcgaatatttcgtctcttattacgactactatcagcccgaagcc
tatgtgccgcgctccgacacttacatcgagaaagagtcgagcgtgaacgagcagatcgac
cgcatgcgccacgccgcgacgcgcgcgctgttggagcgcgacgacgtcatcatcgtcgcc
tcggtttcctgcatttacggcatcggctcggtcgagacctatacggccatgaccttctcg
gtgcagctcggcgagaagctggagccgaagcaattggtgacggatctcgtggcgctacac
tatcgccgcgtgcaggcggatttcacgcgcggcacgttccgcgtgcgcggcgatacgatc
gatattttcccggcccactatgaggatcgcgcctggcgcatttccttcttcggcgacgag
gtggagtcgatctccgaattcgatccgctcaccggcaagaagacggtcgatctcgaattc
gtgaaggtctacgccaattcgcactatgtcacgccgcgcccgacgctgctgcaatcgatc
aaggcgatcaaggacgagctgaagcaccgtctcgacgagctgaatcgttcgggccgtttg
ctggaggcgcaaaggctggagcagcgcacgcgcttcgatctcgaaatgatggaggcgacg
ggcgcctgcgccggcatcgagaattattcgcgctatctcaccggccgcaagcccggcgag
ccgccgccgacgctgttcgaatatctgccggacaatgcgctggtgttcgccgacgaaagt
cacgtcagcgtgccgcagatcggcgcgatgtacaaaggcgacttccgccgcaaggcgacg
ctcgccgagtatggcttccggctgccgtcctgcatggacaatcggccgctgcgcttcgag
gaatgggacgcgatgcggccgcagacggtgagcgtttcggcgacgcccggcaattgggag
ctggagcagaccggcggcgtcttcgtcgagcaggtcatccggccgacgggcctcatcgat
ccgccggtggagatacgttcggcgcgcacgcaggtcgacgaccttctcgacgaggtgcgc
gccaccagcgacatcggctaccgcacgctcgtcaccgtgctgaccaaacgcatggccgag
gacctcaccgaatatctgcacgagagcggcgtgcgcgtgcgctacatgcacagcgacatc
gacacgctggagcgcatcgagatcatccgcgacctgcgcctgggcgccttcgacgtgctg
gtgggcatcaacctgttgcgcgagggtctcgatattcccgaatgcggcctcgtcgcgatc
ctcgacgcggataaggaaggcttcctgcgcagcgagacctcgctggtgcagaccatcggc
cgcgccgcgcgcaatgtcgatggccgtgtgattctctacgccgatcacatcaccggctcg
atgaagcgcgcgatggacgagaccgatcggcgccgcgccaagcaggtggcctataacctc
gaaaacaacatcacgcccgcctcgatcaagcgcggcatcgccgacattctcggcagcgtc
gccgaacaggatcacgtcactgtcgatacgggttatgacatcgcgcccggccataatctc
gcggcgacgatcgcagacctcgaaaagcgcatgaaggaggcggcggcggatctcgccttc
gaggaggcggcgcggctgcgcgacgagatccagcggctgcaaaaggccgagctgctcgcc
gaggcgagcccgatgctgcgaatctcgctctcgcgtcaggcgcgggcaggggcgccgcgc
gatggcgagggactcgcgacccgcgcgcgcaaacccaccgacgccgacatgggcccccac
aattttggcggcggcgaagcgcggccagtgggccgcatgccgccggcgcgtcccgccggg
cggtcgagcggcggcaagcccgggacgcggacgctgaagggaaagccgaagtag
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