Methylocystis iwaonis: SS37A_23850
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Entry
SS37A_23850 CDS
T09113
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS37A_23850 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miwa03019
]
SS37A_23850 (pnp)
03016 Transfer RNA biogenesis [BR:
miwa03016
]
SS37A_23850 (pnp)
Enzymes [BR:
miwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SS37A_23850 (pnp)
Messenger RNA biogenesis [BR:
miwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SS37A_23850 (pnp)
Transfer RNA biogenesis [BR:
miwa03016
]
Prokaryotic type
tRNA degradation factors
SS37A_23850 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
aRib
Motif
Other DBs
NCBI-ProteinID:
BDV34856
UniProt:
A0ABN6VI77
LinkDB
All DBs
Position
2474807..2476960
Genome browser
AA seq
717 aa
AA seq
DB search
MFQVHREELDWAGRKLVLETGKIARQADGAVLASWGETSVLATIVAAKAPKPGQDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSERETLISRLIDRPIRPLFPDAFRCDTQVIVTVLSH
DLENDPDILAMVAASAALTLSGVPFMGPVGGARVGYINGQLKLNPTIEEMKLSELDLVVA
GTQDAVLMVESEAKELSEELMLEAVMTGHRGFQPVIDAIIRLAERAAKDPRDLVVPDRSE
VAAFVSRIAEAELRAAYKLTVKQERYAAVDAVKAKVMAELLPEGEATNFTKEEVGEVFKE
LQAKVVRWNILDTGIRIDGRDVKTVRPIVAEVGVLPRTHGSALFTRGETQALVVATLGTA
EDEQFVDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAMHPMLPAAA
EFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPIKSPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTSNGVTSLQMDIKIAGITEEIMRVALGQAKEGRLHILGEMAK
AITTSRAELGEFAPRIETLKIATDKIRDVIGSGGKVIREICEKTGAKINIEDDGTVKVAS
SDGNSIKAAINWIKSIASDPEVGAIYEGTVVKTADFGAFVNFFGAKDGLVHISQLSKQRV
AKTTDVVKEGDRVKVKLLGFDDRGKVRLSMRVVDQETGEDLEAKEKAEKEAAAANGE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagtccaccgcgaagaactcgactgggccggccgcaagctcgtcctcgagacc
ggcaagatcgcccgccaggccgacggcgccgttctggcgagctggggcgagacctccgtg
ctcgcgaccatcgtcgccgccaaggccccgaagccgggccaggacttcttcccgctgacc
gtcaattaccaggagaaggccttcgccgccggccgcatcccgggcggctatttcaagcgt
gagggccgtccctctgagcgtgagacgctgatctcccgcctcatcgaccgtccgattcgt
ccgctcttccccgacgcgttccgctgcgacacccaggtcatcgtgaccgtgctgtcgcat
gacctcgaaaacgatccggacatcctcgccatggtcgcggcctccgccgcgttgaccctc
tcgggcgtgcccttcatgggccccgtcggcggcgcgcgcgtcggctatatcaacggccag
ctcaagctcaatccgacaatcgaggagatgaagctctccgagctcgatctcgtcgtcgcc
ggcacgcaggacgccgtgctgatggtcgaatcggaagccaaggagctttccgaagagctg
atgctcgaggccgtgatgaccggccaccgcggcttccagccggtgatcgacgcgatcatc
cgcctcgccgagcgcgccgccaaggacccgcgcgacctggtcgttcccgatcgttcggaa
gtcgccgctttcgtctcgcggatcgccgaggccgagctgcgcgccgcctataagctcacc
gtgaagcaggagcgctacgccgccgtcgacgcggtgaaggcgaaggtcatggccgagctc
ctccccgagggcgaagcgacgaacttcaccaaggaggaagtcggcgaggtcttcaaggag
ctgcaggccaaggtcgtccgctggaacatcctcgacaccggcattcgcatcgacggccgc
gacgtgaagaccgtgcgcccgatcgtcgccgaagtcggcgtgctcccgcgcacccatggc
tcggcgctcttcacccgcggcgagacgcaggcgctggtcgtcgccacgctcggcacggcg
gaggacgagcagttcgtcgattcgctagagggcacctataaggagcgcttcctgctccat
tataacttcccgccctactctgtcggcgaaaccggccgcatgggttcgcccggccgccgc
gagatcggccatggcaagctcgcctggcgcgcgatgcacccgatgctgccggcggccgcc
gaattcccctacacgctgcgcgtcgtctcggagatcaccgagtccaacggctcgtcgtcg
atggcgacggtctgcggcacctcgctcgcgctgatggacgccggcgtgccgatcaagtcg
ccgacggccggcatcgccatgggcctgattctggaaggcgagcgcttcgccgtgctctcc
gacattctcggcgacgaggatcacctcggcgacatggacttcaaggtggcgggcacgtcg
aacggcgtgacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
cgcgtcgccctcggccaggccaaggaaggccgcctgcacatcctcggcgagatggccaag
gccatcaccacctcgcgcgcggagctcggcgaattcgcgccgcgcatcgagaccttgaag
atcgcgaccgacaagatccgcgacgtcatcggctcgggcggcaaggtgatccgcgagatc
tgcgagaagaccggcgccaagatcaacatcgaggacgacggcacggtgaaggtcgcctcc
agcgacggcaactccatcaaggcggcgatcaactggatcaaatccatcgcctccgatccg
gaagtcggcgcgatctatgaaggcacagtcgtgaagaccgcggatttcggcgccttcgtc
aacttcttcggcgccaaggacggcctcgtccatatctcgcagctctccaagcagcgcgtg
gcgaagacgaccgacgtggtgaaggaaggcgaccgcgtgaaggtgaagctcctcggcttc
gacgatcgcggcaaggtgcgcctctccatgcgcgtcgtcgatcaggagacgggcgaagac
ctcgaggccaaggaaaaggccgagaaggaagccgccgccgccaatggcgagtga
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