Methylocystis iwaonis: SS37A_24330
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Entry
SS37A_24330 CDS
T09113
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
miwa
Methylocystis iwaonis
Pathway
miwa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SS37A_24330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miwa03019
]
SS37A_24330
03009 Ribosome biogenesis [BR:
miwa03009
]
SS37A_24330
04131 Membrane trafficking [BR:
miwa04131
]
SS37A_24330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
miwa04147
]
SS37A_24330
Messenger RNA biogenesis [BR:
miwa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SS37A_24330
Ribosome biogenesis [BR:
miwa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SS37A_24330
Membrane trafficking [BR:
miwa04131
]
SNARE
SNARE associated proteins
Others
SS37A_24330
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SS37A_24330
Exosome [BR:
miwa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SS37A_24330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_14
AAA_2
AAA_5
AAA_33
CDC48_2
TIP49
nSTAND3
AAA_28
RNA_helicase
AAA_18
AAA_lid_PRS2_C
Mg_chelatase
AAA_3
IstB_IS21
Viral_helicase1
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
BDV34904
LinkDB
All DBs
Position
complement(2523805..2526000)
Genome browser
AA seq
731 aa
AA seq
DB search
MIEKAKQGDGILRLTVVEARREDVGRGVARLDPETLRQIGAAPGEVLEIAGRGKTVAKAM
PTFKEQRGQHLIQLDGVCRTNAGVALGQMVTIRKVAHAIAQKLVVTPLGAGALHEDEIEH
TARRLDGLAIRTGDRVRIALFGGTHRDFLVGRTEPDGPVIVHPDTLLSLERPRSTSSSSA
APSESDDIITYDDLGGMEREVAKIREMVELPLLHPELFERLGITPPKGVLLHGLPGCGKT
LLGRAVANESDADFIYVSGPEIIQKFYGESEARLRKIFEDAQKRAPCIIFFDEIDSLAPK
RERVEGEVEKRVVAQLLALMDGLKSRGDVIVMAATNRPNSLDPALRRPGRFDREIAIGIP
NEQARREILEIYARGMPLGIDIDLADLAATTHGFTGADLNALCREAAMAALRRQLPALTL
GDSPMAYDALMTLEVIMADFAEAMSEVSPSGLREVAVETPNVEWQDVGGLDSIKEALKEA
IAWPVSQPQLFEAIGLQPPRGILLYGPPGNGKTLIAKALASQSNLNFISVKGPELLSKYI
GESELAVRELFARARHAAPCVVFLDEIDSLAPKRGLDGRSPVTDRVVSQLLTELDGVETL
KQVWVIGATNRLDIIDDALLRPGRLDFHLEVTRPDLAARAAILAVHLRKKPVDERVDLDA
LAQAAEGMSAAEVRFLCDRAAMSAIRRIYPTGGTQAVDVGALRIEQRDFDDALTAQIAAS
KQAALSGAAYS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaaagccaagcaaggcgacggaatcctgcgtctcaccgtggtcgaggcgcgg
cgtgaagatgttgggcgcggcgtggcgcggctcgatccggagacattgcgtcagattggc
gccgctccgggagaagttctcgaaattgcgggccgggggaagaccgtcgccaaggcgatg
ccgaccttcaaggaacagagagggcagcatcttattcagctcgacggcgtgtgccgcacc
aacgccggtgtggcgctgggccaaatggtcacgatccgaaaggttgctcacgcgatcgcg
caaaagctcgtggtgactccgctcggcgccggggctttgcacgaagacgaaatcgaacat
accgcgcgccggctggatggtctcgccatccgcaccggcgaccgtgtgcggatcgcgctt
ttcggcggaacgcatcgtgatttcctcgtcggccgaacggagccggatgggcccgtcatc
gttcacccggatacgttgctgtcgttggagcgcccgcggtcgacgtcctcttcttccgcc
gcgccctcggagtccgatgacatcatcacttacgacgatttgggcggcatggagcgcgag
gtcgcgaagatccgcgagatggtggagctgccgctgcttcatccagaactcttcgagcgg
ctcggcataacgccgccgaaaggcgttttgctgcatggccttcccggttgcggcaagacg
cttctggggcgcgcggtcgcaaacgagtcggacgcggatttcatttacgtcagcgggccc
gaaatcattcaaaagttctacggcgagagcgaggcgcgactgcgtaagattttcgaggat
gcgcaaaagcgcgcgccctgcatcatttttttcgatgaaatcgattccctggctcccaaa
cgggagcgggtggaaggcgaagtggaaaagcgcgtcgtcgcccagttgctcgcgctcatg
gacgggttgaagagccgtggcgacgttatcgtcatggcggcgacgaaccgtcccaacagc
ctcgatcccgcattgcgccggcccggaaggttcgacagggagatcgccatcggcattccc
aatgagcaggcgcggcgcgaaatcctcgagatttacgcgcggggcatgccgcttgggatc
gatatcgatcttgctgatctcgcagcgacgacgcatggattcactggcgccgatttgaat
gcgctttgccgggaggcggccatggcggcgctgcgtcgccagcttcccgcattgacgctg
ggggacagccccatggcctatgacgcgctgatgacgctggaagttattatggcggatttc
gccgaagcgatgagcgaggtgtcgccctccggcttgcgcgaagtggcggtggagacgccc
aatgtcgaatggcaggatgtcgggggactcgactccatcaaggaagcgttgaaggaagcg
atcgcctggccggtgagccagccgcagctcttcgaggcgatcggcttgcagccgccgcgc
gggatattgctctatggcccgcccggaaacggaaagacgctgattgcgaaagcgctcgcc
tctcagagcaatttgaacttcatttccgtgaaggggcccgaactcttgtcgaaatatatc
ggcgagtccgaattggccgtccgcgagctttttgcgcgcgcgcgtcatgcggcgccttgc
gtggtgtttctggacgaaatcgactccctcgcgcccaaacgtggcctggacggccggtca
ccggtaacggaccgcgtcgtgagccagttgctcaccgagctcgatggcgtcgagacgttg
aagcaggtttgggtgatcggcgcgacgaaccgtctcgatattatcgacgacgcgttgctc
cggccgggcaggctcgatttccacttggaggtgacgcggcccgatctcgcggcgcgcgcc
gccattcttgcggtgcatttgcgcaaaaagccggtcgacgaacgcgtcgatctcgacgcg
ctcgcccaagcggccgaaggcatgtcggccgccgaagtgcgctttttatgtgatcgcgcc
gcaatgagcgccatccgccgcatttacccgaccggcggaacgcaagccgtcgacgtcggc
gcgctgcgtatcgagcaacgcgatttcgacgatgcgctcacggcgcaaatcgcggcctcg
aaacaagcggcgctgtccggcgccgcctattcctga
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