Methylocystis iwaonis: SS37A_25210
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Entry
SS37A_25210 CDS
T09113
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03030
DNA replication
miwa03430
Mismatch repair
miwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS37A_25210 (holA)
03430 Mismatch repair
SS37A_25210 (holA)
03440 Homologous recombination
SS37A_25210 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miwa03032
]
SS37A_25210 (holA)
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_25210 (holA)
Enzymes [BR:
miwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SS37A_25210 (holA)
DNA replication proteins [BR:
miwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SS37A_25210 (holA)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SS37A_25210 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BDV34992
LinkDB
All DBs
Position
complement(2617628..2618650)
Genome browser
AA seq
340 aa
AA seq
DB search
MVAVSGREAERFVASPPENIFLFLVHGADAGMVRERALAIVGKRVDDRHDPFQFVELSGD
AVSSDPLTLLDEANTTPLFGGRRAILVETGAKSVLPAVTSLVSAPPAACTVVLTASALKK
DAPLRKLVEGAKQGAGIECLPDTEQDIHALVDRTLREANLVATPEARALLLAALGEDRLM
SRAELAKLVLYMHGREHVEAADVETIVAHASSIASDRVVAAAFAGDAGETLDAYFAQGGD
AGAILFGALRYAVALHRARLTIERESGRTDAGVTALFRAGFGFMHRALMEEQLKAWTSPR
LAALIEPLREAQTRARANAASAQMEAERALWRVAKAARRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgccgtctcgggccgcgaggctgagcgcttcgttgcgtctccgccggagaatatc
tttctctttctcgtccatggcgccgacgccggcatggtgcgcgagcgggcgctcgcgatc
gtcggcaagcgcgtggacgatcgccacgatcccttccagttcgtggagctctcgggcgac
gccgtttcctccgatccgctgacgctcctcgatgaagccaacaccacgccgcttttcggc
ggacggcgcgccattctcgtcgagaccggcgcgaaatccgtccttcccgcggtcacctcg
ctcgtctcggcgccgcccgccgcctgcaccgtggttttgacagccagcgcgctgaagaag
gacgcgccgctgcgcaagctggtcgagggggcaaagcagggggcagggatcgaatgcctg
cccgacaccgagcaggatattcacgccctcgtcgaccgcacgctgcgtgaggccaatctt
gtcgcgacgccggaagcgcgcgcgcttctcctcgcggcgctgggcgaggatcggctcatg
agtcgcgccgagctcgccaagctcgtcctttatatgcatgggcgcgagcatgtcgaagcg
gcggatgtcgagacgatcgtcgcgcatgcctcgagcatcgcttctgaccgagttgtagcg
gcggcttttgccggcgacgcgggcgagacgctcgacgcttatttcgcgcaagggggcgat
gcgggcgcgattctcttcggcgccttgcgttacgccgtggcgctgcaccgcgcgcggctc
acgatcgagcgcgagagtggacgcacggacgctggtgtcacggcgctgtttcgcgccggc
ttcggcttcatgcatcgcgcgctgatggaggagcagctcaaggcctggacctcgccgcgt
ctcgccgcgctgatcgagccgctgcgcgaggcccaaacccgcgcccgcgccaatgcggca
agcgcgcaaatggaggccgagcgggcgttgtggcgggtcgcgaaggcggcgcggcgaagg
tga
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