Methylocystis iwaonis: SS37A_33000
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Entry
SS37A_33000 CDS
T09113
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
miwa
Methylocystis iwaonis
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miwa03032
]
SS37A_33000 (ihfB)
03036 Chromosome and associated proteins [BR:
miwa03036
]
SS37A_33000 (ihfB)
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_33000 (ihfB)
DNA replication proteins [BR:
miwa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SS37A_33000 (ihfB)
Chromosome and associated proteins [BR:
miwa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SS37A_33000 (ihfB)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SS37A_33000 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BDV35771
UniProt:
A0ABM8ECP5
LinkDB
All DBs
Position
complement(3498561..3498851)
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AA seq
96 aa
AA seq
DB search
MIKSELIQRIARRNGHLYQRDVETIVSTILDEITAALARGDRVELRGFGAFSVKKRDART
GRNPRTGAQVSVQEKSVPFFKTGKEMRERLNENYQG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtcggagcttattcagcgaattgcacgccgcaacggtcatctttaccaacgt
gacgtcgagacgatcgtcagcacgatcctcgacgagatcacagcggctctggcgcgcggc
gaccgggttgagctgcgcggtttcggcgctttctcggtcaagaaacgggacgcgcgcact
ggccgcaacccgcgcacgggcgcgcaagtctccgtgcaggaaaaatccgtgcccttcttc
aagacgggcaaggagatgcgcgaacgcctgaacgagaactaccagggctga
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