Methylocystis iwaonis: SS37A_33060
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Entry
SS37A_33060 CDS
T09113
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SS37A_33060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miwa03021
]
SS37A_33060 (rpoA)
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_33060 (rpoA)
Enzymes [BR:
miwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SS37A_33060 (rpoA)
Transcription machinery [BR:
miwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SS37A_33060 (rpoA)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SS37A_33060 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
BDV35777
UniProt:
A0ABM8ECR0
LinkDB
All DBs
Position
complement(3502900..3503919)
Genome browser
AA seq
339 aa
AA seq
DB search
MSIQKNWQELIKPNKLDVTPGDDPRRVATAVAEPLERGFGVTLGNALRRILLSSLQGAAI
TSIHIDGVLHEFSSIPGVREDVTDIVLNIKDISVKYQGEGVKRLTLKKTGPGIVTAGDIQ
ATGDVQVLNPDLVICTLDEGAEFRVEFTISTGKGYVPADRNRAEDAPIGLIPVDSLYSPV
KKVSYRVENTREGQVLDYDKLTLTVETNGAITPEDALAFSARILQDQLNVFVNFEEPRRE
EAAPSIPQLAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatccagaagaactggcaggaactcatcaagccgaacaagctcgacgtgacgccc
ggcgacgatccgcgccgcgtggcgaccgccgttgccgagccgctggagcggggcttcggc
gtgacgctcggcaacgccctgcgccgcattcttctctcgtcgctgcagggcgcggcgatc
acctcgattcacatcgacggcgttctgcacgaattttcgtcgatccccggcgtgcgcgag
gacgtgaccgacatcgtcctcaacatcaaggacatttcggtcaagtatcagggcgagggc
gtgaagcgcctgacgctcaagaagacgggcccgggcattgtcaccgctggcgacattcag
gcgacgggcgacgtgcaggttctcaaccccgacctcgtcatctgcacgctcgacgagggc
gccgagttccgcgtcgaattcaccatttcgaccggcaagggctatgtgccggctgaccgc
aatcgcgccgaggatgcgccgatcggcctcatcccggtggacagcctttattcgccggtg
aagaaggtcagctatcgcgtcgagaacacccgcgaaggccaggtgctcgactatgacaag
ctgacgctgaccgtcgagaccaatggcgcgatcacgccggaggacgcgctcgctttctcg
gcgcgcatcctgcaggatcagctgaacgtcttcgtcaatttcgaggagccgcgccgcgaa
gaggccgccccgtcgatcccgcagctcgccttcaatccggcgctgctcaagaaggtcgac
gagctggagctttcggtgcgctcggcgaattgcctgaagaacgacaatatcgtctatatc
ggcgaccttattcagaagtcggaggcggaaatgctccgcaccccgaacttcggccgcaaa
tccttgaacgagatcaaggaagtccttgcgcagatgggcctgcatctgggcatggaagtc
cccggctggccgccggagaacatcgacgatctcgccaagcggttcgaagagcattattga
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