Microbacterium sp. XT11: AB663_001654
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Entry
AB663_001654 CDS
T04243
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mix
Microbacterium sp. XT11
Pathway
mix03420
Nucleotide excision repair
mix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB663_001654
03430 Mismatch repair
AB663_001654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mix03400
]
AB663_001654
Enzymes [BR:
mix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB663_001654
DNA repair and recombination proteins [BR:
mix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB663_001654
MMR (mismatch excision repair)
Other MMR factors
AB663_001654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
EcoR124_C
AAA_16
FWWh
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALX66460
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All DBs
Position
1729143..1731620
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AA seq
825 aa
AA seq
DB search
MTEAPLIVPGSIGPRSSSAERGDDEFLAGLNPQQLEAVTYRGPALLIVAGAGSGKTSVLT
RRIASLLRSREAWPSQILAITFTNKAAGEMRERVENIVGQAARGMWISTFHSACVRILRR
EAAQFGFTSSFTIYDSGDSRALLKRLVKEHEADAYGHTPASVQARISKLKNELADAESYA
RQANMADPAERVFVELFADYQRQLQRANAFDFDDLIGQTVYLFRAFPQVADTYRRRFRHI
LVDEYQDTNHAQYALIHELTRPVSGPSAGSGNGYEASNGMMIFEPDPSSGSESGDTAGAS
LTVVGDSDQSIYAFRGADIRNISEFERDFPGAKVVLLEQNYRSTQNILSAANAVIGNNFD
RKEKKLWSDKGDGDKIIGFTGYSQHDEAQFVADEIEALRRAGVPYSEMAVFYRTNSQSRA
LEEIFIRSAVPYKIMGGTKFYERAEIKDALAYLVAVANPADEMAVRRILNKPRRGIGDVT
ETAIARFADEHGITFRQALSVPGELGVGPKLQSAIAQLDAVLAEATEILLPSSGEVPPPT
SVAEGLSLLLSKSGYLDALRASRDPQDEARLENLDEFIAVARDFARNNPEGTIVDFLTEV
ALVSDADDLDDESGVVSLMTMHTAKGLEYDAVFVTGVEEDLIPHRISAGEPGGPQEERRL
FYVAITRARKRLHLSLAMTRAQFGEVSVAMPSRFLQEIPASLIDWRQSPGDVNSRGGMQS
RALNARRAGGFGGSGDRFGVKPLPTREKLTPLSTAMDKIPNRVTAKMRDNGDLELAAGDR
IRHSDFGEGRVDAVTGEGAKRIAHVRFDTAGLKKLLIKVAPIEKI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcccctctcatcgtccccggatccatcggcccgcgctcctcctcggcagag
cgcggagacgacgagttcctcgccggcctgaacccgcagcagctcgaggccgtcacctat
cgcggaccagcgctgctcatcgtcgccggcgccggatcggggaagacgagcgtgctcacg
cgccgcatcgcctcgctgctccgctcgcgtgaggcgtggccgagccagatcctcgccatc
accttcacgaacaaggcggcgggcgagatgcgcgagcgcgtcgagaatatcgtcgggcag
gcggcccgcggcatgtggatctcgaccttccactcggcctgcgtgcgcatcctccgccgt
gaggccgcgcagttcggcttcacgtcgtcgttcacgatctacgactcgggcgactcccgc
gccctgctgaagaggctcgtcaaggagcacgaggccgacgcctacgggcacacgcctgcg
tcggtgcaggcccgcatctccaagctcaagaacgagctcgccgacgccgagtcctacgcg
cggcaggcgaacatggccgatccggcggagcgggtgttcgtcgagctgttcgccgattac
cagcgtcagctgcagagggccaacgccttcgacttcgacgacctcatcggccagacggtg
tacctgttccgggcgttccctcaggtcgccgacacctatcgccgccgcttccgccacatc
ctcgtcgacgagtaccaagacaccaaccatgcgcagtacgcgctcatccacgagctcacg
cgcccggtctccggtccttcggcgggctcgggaaacggatacgaggcgtcgaacggcatg
atgatcttcgagcccgacccgtcgtccggctcagagtccggtgacacggcgggcgcctcg
ttgaccgtggtcggcgactccgaccagtcgatctacgccttccgcggcgcggacatccgc
aacatcagcgagttcgagcgcgacttccccggcgcgaaggtcgtgctcctggagcagaac
taccgctccacgcagaacatcctgtccgcagcgaacgccgtcatcggcaacaacttcgac
cgcaaggagaagaagctgtggagcgacaagggcgacggtgacaagatcatcggcttcacc
gggtattcgcagcacgacgaggcccagttcgtcgccgacgagatcgaggccctgcgccgt
gcgggggtgccgtactccgagatggccgtgttctaccgcacgaactcgcagtcgcgcgct
ctggaggagatcttcatccggtcggcggtgccgtacaagatcatgggcggcacgaagttc
tacgagcgcgccgagatcaaagacgccctggcctacctcgtcgcggtcgcgaacccggcc
gacgagatggccgtccgccgcatcctcaacaagccgcgccgaggcatcggcgacgtgacc
gagacggcgattgcgcgcttcgccgacgaacatggcatcaccttccgccaggcgctgtcg
gtgccgggagagctcggggtcggccccaagctgcagtcggcgatcgcgcagctcgacgcc
gtgctcgccgaggcgaccgagatcctgctgccctcgtcgggtgaggtcccgccgccgacg
agcgtggcggagggtctcagcctgctcctgtcgaagagcggctacctcgacgcgctccgc
gcgagccgtgacccgcaggacgaagcccgcctcgagaacctcgacgagttcatcgctgtc
gcccgcgacttcgcccgcaacaaccccgagggcacgatcgtcgacttcctcaccgaggtt
gctctggtctccgacgccgacgacctcgacgacgaatcgggcgtcgtgtcgctcatgacc
atgcacacggcgaagggtctcgagtacgacgccgtgttcgtgacgggcgtcgaagaagac
ctcatcccgcaccgcatctcggcgggggagccagggggtccgcaagaggagcgccggctg
ttctacgtggcgatcacgcgcgcgcggaagcggctccatctgtccctggccatgacgcgc
gcgcagttcggcgaggtgtccgtggccatgcccagccgcttcctgcaggagatccccgcc
tcgctgatcgactggcggcagtcaccgggcgacgtcaattcccgcggcggcatgcagtcc
cgtgccctcaacgcgcgccgcgctgggggcttcggcggctcgggcgaccgcttcggcgtg
aagccgctgccgacgcgcgagaagctcacgccgctctcgaccgcgatggacaagatcccc
aaccgtgtgacggccaagatgcgcgacaacggcgacctcgagctcgccgcgggcgatcgc
atccgtcattccgatttcggcgaagggcgcgtcgacgcggtcaccggcgagggcgcgaag
cgcatcgcgcacgtgcgtttcgacacggcaggtctgaagaagctcctcatcaaggtggct
ccgatcgagaagatctga
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