Microbacterium sp. XT11: AB663_001671
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Entry
AB663_001671 CDS
T04243
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mix
Microbacterium sp. XT11
Pathway
mix03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB663_001671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mix03000
]
AB663_001671
03400 DNA repair and recombination proteins [BR:
mix03400
]
AB663_001671
Enzymes [BR:
mix01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AB663_001671
Transcription factors [BR:
mix03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AB663_001671
DNA repair and recombination proteins [BR:
mix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB663_001671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALX66475
LinkDB
All DBs
Position
1749446..1751017
Genome browser
AA seq
523 aa
AA seq
DB search
MSFPLTDFDERYRAISARDTRFDGQFVTAVRSTGIYCRPSCPARTPKPENVTFFPTSAAA
HEAGYRACKRCLPEAAPGSPAWNLRGDAAARAMRLIADGVVEREGVPGLAARLGYSTRHL
TRLLTAELGAGPLALARAHRAHTARMLLVGTDMPVSEVAFSAGFASIRQCNDTIREVFGM
TPVELRARRPAGGGAAPGEIDLVLPHRGPLDTAGVFAWMAARAVPGVEDATASSFSRHLR
MPGGPVWFEVRQDPAARLHLRARVTRLGDLAPLVSTVRRIFDLDADPVAIDEALSSHAEL
APLVARTPGIRVPGSADPHEMLIRAMIGQQITVAAARTALTALTEALGERTPDGMLFPTM
TAIAEHGAEVLRGPAARIRAITGAAAALADGSLTLTVGDDAGEQRAALLAMPGIGPWTAD
YVRMRILGDPDILLPGDVALRAGAAASGLPGEPAPLTAWAVRAAPWRSYLSAHLWRAAPV
RAPRAPGAARSSRTAGSTRSTRSTRTAPTSPVSVVAGSTKEKS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcccgctgaccgacttcgacgagcgctaccgcgcgatcagcgctcgggatacc
cggttcgacgggcagttcgtgacggctgtccgctcgaccgggatctactgccggccgagc
tgccccgcccgcacgcccaagccggagaacgtcacgttcttcccgacgagtgcggcggcc
cacgaagccggttaccgggcgtgcaagcgctgccttcccgaagccgcaccgggctcgccg
gcgtggaacctccgcggcgacgcggctgcgcgcgccatgcggctcatcgccgacggcgtc
gtggagcgcgagggcgtgccggggctcgccgcgcggcttgggtattcgacccgacacctc
acccgactgctcacggcggagctcggggcgggtcccctcgcgctcgctcgggcgcaccgg
gcgcacaccgcgcggatgctgctggtcggcacagacatgcccgtgtcggaggtggcgttc
tccgcaggtttcgcgagcatccgtcagtgcaacgacaccatccgcgaggtcttcggcatg
acgccggtcgagctccgggcgcgccgccccgcgggcggaggtgccgccccgggagagatc
gacctcgtgctgccgcatcgcggtcccctcgacaccgcaggcgtcttcgcctggatggcg
gcgcgcgcggtcccgggcgtggaggatgccacggcctcgtcgttctcgcggcatctgcgg
atgccgggaggaccggtgtggttcgaggtgcgtcaagaccccgctgcacggctgcatctg
cgggccagagtcacgcggctcggcgacctcgcccccctcgtgtccaccgtgcggcgcatc
ttcgacctcgacgccgaccccgtcgcgatagacgaggcgctgtcctcccacgcagagctg
gctccgctcgtcgcgcggacgcccggcatccgggtacccggctccgccgatccgcacgag
atgctgatccgcgcgatgatcggccagcagatcacggtcgcggcggcacgcaccgctctg
acggcgctcaccgaggcgctgggggagcgaaccccggacgggatgctcttcccgacgatg
acggcgatcgccgagcacggcgccgaggtcctccgcggtccggcggcgcgcatccgcgcg
atcaccggggcggcggccgcgctcgccgacgggtcgctcaccctgaccgtcggcgacgac
gccggcgagcagcgcgccgctctgctcgccatgccaggcatcggcccgtggacggccgat
tacgtgcgcatgcggatcctcggcgatcccgacatcctcctgcccggtgacgtcgcgctg
cgagcgggcgccgcagcatccgggcttccgggcgagcccgccccgctcaccgcgtgggcc
gtccgcgcggcaccgtggcgcagctatctcagcgcacacctctggcgggccgcaccggtg
cgcgcgccgcgtgcgcccggcgccgcgcgctcgagccgcaccgccggctcaacccgctca
acccgctcaacccgcactgccccgacgtcaccggtctcggtggtagccggttcgacgaag
gagaaatcatga
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