Microbacterium sp. XT11: AB663_002162
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Entry
AB663_002162 CDS
T04243
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mix
Microbacterium sp. XT11
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mix03016
]
AB663_002162
Enzymes [BR:
mix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB663_002162
Transfer RNA biogenesis [BR:
mix03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB663_002162
Prokaryotic type
AB663_002162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ALX66773
LinkDB
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Position
2277715..2278608
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AA seq
297 aa
AA seq
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MVAPGILLVDKPAGMTSHDVVARARRALGTRKVGHAGTLDPMATGLLVIGVEGATRLLTY
IVGVGKTYEATIRLGQSTTTDDADGEIVQAATASAWETVTPERIREGISALTGRISQVPS
SVSAIKVDGRRAYDRVRSGEDVVLAPREVTVSRFDVRARREADGVIDLDVVVDCSSGTYI
RSLARDLGARLGVGGHLTALRRTKVGEFSVQDAASVDELRSAAMMSPADAASRVMPVLHV
TAEDARDLRHGKRLAGQASRIAGGAAAAIDPDGVLVGVVEKRGPDLKSAMNMAEEAR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcacccggcatcctcctcgtggacaaaccggctgggatgaccagccacgacgtg
gtcgcacgcgcgcgccgcgcgctcggcactcggaaggtcgggcacgcggggactctcgat
cccatggcgaccgggttgctggtgatcggcgtcgaaggcgcgacgagactgctcacgtac
atcgtcggggtgggcaagacctatgaggcgacgatccgtctcgggcagtccaccacgacc
gacgacgcagacggcgagatcgtgcaggcagcgacggcatccgcatgggagaccgtgacc
cctgaacgcatccgcgaaggcatcagcgcgctcaccggccgcatctcgcaggtgccgagc
tccgtctccgcgatcaaggtcgacggccgccgcgcgtacgaccgggtgcggtcaggagaa
gacgtcgtgctggcgccccgcgaggtcacggtctcgcgcttcgacgtgcgcgcacgacgg
gaagccgacggagtcatcgacctcgacgtcgtcgtcgactgctcatccggcacgtacatc
cggtctctcgcccgcgacctgggcgcacgactcggcgtggggggtcatctcacggccctg
aggcggacgaaggtcggcgagttctccgtgcaggacgcggcatccgtcgacgagctccga
agcgcggcgatgatgtcgccggcggacgcggcatcccgtgtcatgccggtgttgcacgtg
acggccgaggacgcgcgcgacctgcgccacggcaagcgcctcgccggccaggcgtcccgc
atcgccgggggcgcggcagccgcgatcgacccggacggcgtgctcgtgggagtggtggag
aagcggggtcccgatctgaagagcgccatgaacatggctgaggaggcccgatga
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