Microbacterium sp. XT11: AB663_002218
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Entry
AB663_002218 CDS
T04243
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mix
Microbacterium sp. XT11
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mix03016
]
AB663_002218
Enzymes [BR:
mix01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AB663_002218
Transfer RNA biogenesis [BR:
mix03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AB663_002218
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
DUF5548
Motif
Other DBs
NCBI-ProteinID:
ALX66816
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Position
2335871..2337418
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AA seq
515 aa
AA seq
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MTIPRSEPTIIRASSAAIDADGRRRSYEVRTFGCQMNVHDSERLAGSLESAGYVRAAAGD
EADVVIINTCAVRDNAAGKLYGTLGHLAAVKRRKEGMQIAVGGCLAQMDKQAVLDKAPWV
DVVFGTHNMGSLPGLLERARHNGEAELEILESLEVFPSTLPTKRDSAHSGWVSISVGCNN
TCTFCIVPSLRGKEKDRRPGDILNEIRLLVEDGAIEITLLGQNVNSYGVEFGDRQAFGKL
LRAAGEIEGLERIRFTSPHPAAFTDDVIDAMAETPSVMPQLHMPLQSGSDRILRAMRRSY
RSERFLGILDRVRERIPHAAITTDIIVGFPGETDEDFEDTLRVVEQARFSGAFTFQYSIR
EGTPAAAMEDQIPKEVVQERYDRLIALQERISLEENQKQVGREVEVLVSVGEGKKDAETH
RLTGRAQDNRLVHFEVTPGSEIPRPGDAVTVTITHAAPFHLLADDPTGAPLRIRRTRGGD
AWDRAQAESCAVPAPAAAGGPRPVSLGLPTLRVGV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgactatcccgcgcagtgagccgacgatcatccgtgcgtcatcggcggcgatcgatgcc
gacggccgtcggcggtcttatgaggtccgcaccttcgggtgccagatgaacgtccacgac
tctgagcgattggccggttcgctcgagagcgcgggctacgtgcgggctgccgccggagat
gaggctgatgtcgtcatcatcaacacctgcgcggtgcgcgacaacgcggcaggcaagctc
tacggcacgctcgggcatctggcggccgtgaagcgtcgcaaggagggcatgcagatcgcc
gtcggtggatgcctcgcccagatggacaagcaggccgtcctcgacaaggctccttgggtc
gacgtcgtgttcggcacccacaacatgggctcgcttccgggcctcctcgagcgcgcacgg
cacaacggcgaggccgagctcgagatcctcgaatcgctcgaggtgttcccgtccacgctt
ccgacgaaacgggactctgcgcacagcggctgggtgtcgatctcggtcggctgcaacaac
acctgcaccttctgcatcgtgccgagtctgcgcggcaaggagaaggaccgtcgacccggt
gacattctcaacgagatccggctgctggtcgaagacggcgccatcgagatcacgctcctg
ggccagaacgtgaattcgtacggtgtggagttcggcgaccgccaggcgttcggcaagctc
ctccgcgctgcgggcgagatcgagggtctcgagcggatccgcttcaccagcccacatcct
gcggccttcaccgacgacgtcatcgatgcgatggcggagacgcccagtgtcatgccgcag
ctgcacatgcccctccagtcgggtagcgaccgcatcctccgcgcgatgcgccgttcctac
cgcagcgagcggttcctcggcatcctcgaccgggtgcgcgagcgcatcccgcacgccgcg
atcaccaccgacatcatcgtcggtttccccggtgagactgacgaggacttcgaagacacg
ctgcgcgtcgtcgaacaggcgcgcttctccggtgcgttcacgttccagtactcgatccgc
gagggtacgcctgcggccgccatggaggaccagatccccaaggaggtcgtccaggagcgc
tacgaccgtctgatcgccctccaggagcgcatctccctcgaggagaatcagaagcaggtc
ggccgcgaggtcgaggtcctcgtctccgtcggagagggcaagaaggatgccgagacccac
cggctcaccggtcgtgctcaagacaatcgcctcgtgcacttcgaggtgaccccgggttcc
gagatcccgcgccccggtgacgccgtcaccgtgaccatcacccacgccgctccgttccac
ctgctcgccgacgatccgacgggagcgccgctgcgcatccgccgcacgcgcggaggcgac
gcgtgggaccgggcgcaagccgagtcgtgcgcggttcccgcccctgcggcggcgggcggc
ccgcgcccggtgtccctggggctgcccactctgcgcgtgggcgtgtga
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