Microbacterium sp. XT11: AB663_002508
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Entry
AB663_002508 CDS
T04243
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mix
Microbacterium sp. XT11
Pathway
mix03030
DNA replication
mix03410
Base excision repair
mix03420
Nucleotide excision repair
mix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB663_002508
03410 Base excision repair
AB663_002508
03420 Nucleotide excision repair
AB663_002508
03440 Homologous recombination
AB663_002508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mix03032
]
AB663_002508
03400 DNA repair and recombination proteins [BR:
mix03400
]
AB663_002508
Enzymes [BR:
mix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB663_002508
DNA replication proteins [BR:
mix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB663_002508
DNA repair and recombination proteins [BR:
mix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB663_002508
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB663_002508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALX66959
LinkDB
All DBs
Position
complement(2598347..2600953)
Genome browser
AA seq
868 aa
AA seq
DB search
MVVDGHSLAYRAFFALPVDNFTTKDNQHTNAIYGFLSMLVNLIKAEKPTHMAIAFDTSRH
SFRTDEYPEYKATRSETPQEFKGQIPLLQDCLAAMSIPVLTKEGFEADDILATLSTQGAA
QGYDVLVVSGDRDTIQLVTDEITLLYPSVQGVSQLKRYDPTTVMERYGVRPEQYPDIAAL
VGETSDNLPGVPKVGEKTAVKWLRQFGSLDELLSRADEIKGVVGGNLREHIDDVRRNRKL
NRLLTDIELPVGPGDLGVQPIDAQAVRDIFARLEFRTLLPRVFEAVGAGEVADDPASVVE
LPVPAEVPAAELAEWAATRSGDVALRITTVGGLPARIGAATESELREVDWNDETAAALRE
WLESDHPKVLHDAKPQVKALLRDGVRLGGLAYDTSLAGWLLRPSFPDKTLSDLVQRYLGE
KLPEADPSQLVPETEGATPSQEAWFALRVATALRDDLPADVARVLTDIELPTLVTLADME
VAGVTVSHDVLSTFSAELGARADGLAQEAFALVGREFNLGSPKQLQEVLFDDLQLPKTRK
TKTGYSTDAAVLADLQESHPHPFLGLLLQHREATKLRQIIESLDTAIGADRRIRTTYVQT
GSQTGRLSSTDPNLQNIPVRTEESRRIRSAFQVGEGYESLLTADYSQIEMRIMAHLSGDE
GLIEAFNSGEDLHRFVGARVFGVAPADVTPAMRTKVKAMSYGLVYGLSAFGLSKQLRIEQ
AEAKQLMVEYFARFGAVRDYLRASVMKAKEVGYTETIFGRRRPFPDLSSPNRVLRENAER
AALNAPIQGSAADIMKIALFHIHDDLRAEGLRSRVLLQIHDELVVEVAPGEWDAAERIVR
TRMGDAAELSVPLDVQVGRGQDWNEAAH
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcgacggccactctctcgcctaccgggccttcttcgccctgccggtggacaac
ttcaccaccaaggacaaccagcacacgaacgccatctacggcttcctctcgatgctggtg
aacctcatcaaggccgagaagccgacgcacatggcgatcgccttcgacacgtcgcggcac
tccttccgcacagacgagtacccggagtacaaggcgacgagatccgagacgccgcaggag
ttcaaggggcagatcccgctcctgcaggactgcctcgcggccatgtcgatccccgtgctc
acgaaggagggcttcgaggcagacgacatcctcgcgaccctctcgacgcagggggccgca
caggggtacgacgtgctcgtcgtatcgggagaccgcgacacgatccagctcgtcaccgac
gagatcacccttctctacccgtcggtccagggtgtgtcgcagctcaagcgctacgatccg
acgaccgtgatggagcgctacggcgtgcgcccggagcagtaccccgacatcgccgcgctg
gtgggcgagacgagcgacaacctccccggcgtgcccaaggtgggcgagaagaccgcggtc
aagtggctgaggcagttcggctccctcgacgaactgctgtcaagggccgacgagatcaaa
ggcgtggtgggcggcaatcttcgcgagcacatcgacgacgtccggcgcaatcgcaagctg
aaccgtctgctcaccgacatcgagctgcccgtcggtccgggcgatctcggcgtgcagccg
atcgacgcgcaggcggtccgtgacatcttcgcgcgactcgagttccgcactctgctcccg
cgcgttttcgaggcggtcggcgccggcgaggtcgccgacgaccccgcgtcggtcgtcgag
ctgccggtaccggctgaggtccccgcggccgagttggcggagtgggcggcgacgcggtcc
ggcgacgtcgcacttcggatcacgaccgtcggcggcctgcccgcgcgcatcggcgccgcc
accgagtccgagctccgcgaggtcgactggaacgacgagacggccgcggctctgcgggag
tggctcgagtccgaccaccccaaggtgcttcacgacgccaagccgcaggtgaaggccctc
cttcgcgatggcgtgcgcctcggtggcctcgcctacgacaccagcctggccggctggctg
ctgcggccgagcttccccgacaagacgctcagcgacctggtgcagcggtacctcggcgag
aagctgcccgaggccgatccctcgcaactcgtccccgagacggagggggcgaccccgtcg
caggaggcgtggttcgccctccgagtcgcgaccgctctccgcgacgacctgcccgcggac
gtcgcgagagtcctgaccgacatcgagctgcccactctcgtcacgctcgccgatatggag
gtcgccggcgtcaccgtgtcgcacgatgtgctgtcgacgttctcggcggagctgggcgcg
cgtgcggacgggctcgcgcaggaggccttcgccctcgtggggagggagttcaacctcggc
tcgcccaagcagttgcaggaggtgctcttcgacgacctgcagcttcccaagacgcggaag
acgaagaccgggtactccacggatgccgcggtgctggccgatcttcaggagagccacccg
catcccttcctcggcctgcttctccagcaccgggaggcgacgaagctgcgtcagatcatc
gagtccctcgacacggcgatcggcgccgaccgccggatccggacgacctacgtgcagacc
gggagccagaccgggcgcctgtcgagcaccgatccgaacctgcagaacatcccggtgcgc
acggaggagtcccgccgcatccgcagcgcgttccaggtgggagaggggtacgaatccctg
ctcacggcggattattcgcagatcgagatgcgcatcatggcgcatctctccggcgacgag
ggcttgatcgaagcgttcaacagcggtgaggatctgcatcgcttcgtcggtgcgcgggtc
ttcggcgtcgccccggccgacgtgacgcctgccatgcgaacgaaggtcaaggcgatgtcg
tacggtctcgtgtacgggctctcggccttcgggctctccaagcagcttcgcatcgagcag
gccgaagccaagcagctcatggtcgagtacttcgcgcgattcggcgccgtgcgcgactat
ctgcgagcgtcggtgatgaaggccaaggaggtcggctacaccgagacgatcttcggacga
cgccgcccgttccccgacctctctagccccaaccgggttctccgcgagaacgcggagcgc
gccgccctcaacgctcccatccagggcagcgccgccgacatcatgaagatcgcgctcttc
cacatccacgacgacctccgcgccgaggggctgcgctcacgcgtgctgctccagatccac
gacgagctcgtggtggaggtcgctccgggggagtgggatgccgcagagaggatcgtgcgc
acgcgcatgggcgatgccgcagagctctcggtgccgctcgatgtgcaggtcggtcgcggt
caggactggaacgaggccgcccactga
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