Microbacterium sp. XT11: AB663_002890
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Entry
AB663_002890 CDS
T04243
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mix
Microbacterium sp. XT11
Pathway
mix03030
DNA replication
mix03430
Mismatch repair
mix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB663_002890
03430 Mismatch repair
AB663_002890
03440 Homologous recombination
AB663_002890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mix03032
]
AB663_002890
03400 DNA repair and recombination proteins [BR:
mix03400
]
AB663_002890
Enzymes [BR:
mix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB663_002890
DNA replication proteins [BR:
mix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB663_002890
DNA repair and recombination proteins [BR:
mix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB663_002890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ALX67157
LinkDB
All DBs
Position
complement(2982002..2985520)
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKIGAMTQAAAEYGMPAIAVTDHGNTFAAFEFYRAAQAA
GVKPIIGLEAYVTPGTHRSDKSRVQWGSPDQKSDDVSGSGAYTHMTMWSQSTEGMHNLFR
LSSLSSIEGYYFKPRMDRELLQTYGKGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLSIERRVMTDLLRLAKDLGIPLVATNDSHYTHQHEADAHAALLCV
QSGSTLDDPNRFKFDGDGYYIKTAAEMRQLFRDHPEACDNTLLIAERCEVEFNTSANYMP
RFPVPPGETEDSWLIKEVEKGLHYRYPNGIPDKVRKQAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMKITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIDYVTEKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPPV
MGKDMPLDGMFDPAHPRYKEASEFRALIETDPEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSEPLLDIIPIMRREQDGQIVTQFDYPSCETLGLIKMDFLGLRNLTIISDALDNIRSNRG
EDLDLEHLTLDDRAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVIALYRPG
PMGANSHTNYALRKNGQQPITPIHPELEEPLKDILDTTYGLIIYQEQVMAIAQRVAGFSL
GQADILRRAMGKKKKSELDKQYEGFAGGMTERGFSEGAIKALWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIRVLPPDVSESINF
FAAVGDDIRFGLGAVRNVGSNVVDGIVEARKDGAFTSFHDFLDKVPLHVANKRTVESLIK
AGAFDSMGDTRRALLEIHEDAVEAAVDRKRNEAQGAIGFDFDSLYDGLEETAPPKVPARP
EWVKKDKLAFEREMLGLYVSDHPLAGLEVALAKHASISIHDLNNSEDLQDGDQVTVAGLV
TSVQHRVAKASGNPYGMITVEDFNGEVTVMFMGKTYTEFQHILQQDSILAVRGRVSRRDD
GLNLHAQSAFAPDVGSFDASGPLSLVLAEQRATESVMTDLAEVLRRHRGDTEVVLRVHRG
GTAKVFDVPMPVKVSADLFGDLKSLLGPSCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgactccttcgtccacctgcatgtgcacagcgagtattcgatgttggacggg
gccgccaagatcggcgcgatgacgcaggcggccgccgagtacggcatgccggccatcgcc
gtgaccgaccacggcaacaccttcgcggccttcgagttctaccgcgccgcgcaggccgcc
ggggtgaagccgatcatcggtctggaggcgtatgtcacccccggtacgcaccgcagcgac
aagtcccgtgtgcagtgggggtctcccgaccagaagagcgacgacgtctccggttccggt
gcgtacacccacatgacgatgtggagccagagcaccgagggcatgcacaacctgttccgg
ctgagctcgctgtcgagcatagagggctactacttcaagccccgcatggaccgcgaactg
ctgcagacctacggcaagggcctgatcgcgacgacgggatgcccgtcgggggaggtgcag
actcgcctgcggctcggtcagtacgacgccgcgcgcgccgcggcggccgagttccaggac
atcttcggcaaggagaactacttcgccgagatcatggatcacgggctctccatcgagcgc
cgggtgatgacggatctgctccgtctcgcgaaggatctcggcatccctctggtcgccacg
aacgactcccactacacgcatcagcacgaggccgatgcccacgctgctctgctgtgcgtg
cagtccggatccacgctcgacgacccgaaccgcttcaagttcgacggcgacggctactac
atcaagaccgccgccgagatgcgtcagctgttccgcgatcaccccgaggcctgcgacaac
acgctgctcatcgccgagcgctgcgaggtcgagttcaacacctccgccaactacatgccg
cggttccccgtgcctccgggcgagaccgaggacagctggctcatcaaggaggtcgagaag
ggcctccactaccgctatccgaacggcatccccgacaaggtgcgcaagcaggccgagtac
gagaccggcatcatcctgcagatggggttccccgggtacttcctcgtcgtcgccgacttc
atcaactgggcgaaggacaacggcatccgcgtcgggcccggtcgaggatcgggagccgga
tcgatggtcgcgtacgccatgaagatcaccgacctcgacccgctcgagcacggactcatc
ttcgagcggttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgac
gaccgtcgtcgcggcgaggtgatcgactacgtcacggagaagtacggttcggagcgcgtc
gcgcagatcgtcacgtacggcaccatcaagtccaagcaggcgctcaaagacgcaggccgg
gtgctcggcttccccttcagcatgggggagcggctcaccaaggccatgccgccgcccgtg
atgggcaaggacatgcccctcgacggcatgttcgacccggcgcatccccgctacaaggag
gccagcgagttccgggcactgatcgagaccgatcccgaggccaagacggtgttcgaccgc
gcgctcggcctcgaagggctcaagcggcaatggggcgtgcatgcggccggcgtcatcatg
tcctccgaaccgctgctcgacatcatcccgatcatgcgccgcgagcaggacgggcagatc
gtcacgcagttcgactacccgtcctgcgagacgctcggtctgatcaagatggacttcttg
gggctgcgcaacctcacgatcatctccgacgccctcgacaacatccgctccaaccgcggt
gaggatctcgacctcgaacacctcaccctcgacgaccgcgccgcgtacgaactgctcgcc
cgaggcgacacgctcggcgtcttccagctcgacggcgggccgatgcggtcattgctgcgc
ctgatgaagcccgacaatttcgaggacatctcggccgtcatcgcgctgtaccgcccagga
cccatgggcgccaactcgcacacgaactacgcgctgcgcaagaacggacagcagccgatc
actccgatccatccggagctcgaagagccgctcaaggacatcctcgacaccacctacggc
ctgatcatctatcaggaacaggtcatggccatcgcccagagagtcgcgggattcagcctc
ggccaggccgacatcctgcgtcgcgccatgggaaagaagaagaagtccgagctcgacaag
cagtacgagggcttcgccggaggcatgaccgaacgcggattcagcgagggtgcgatcaag
gcgctgtgggacatcctgctgccgttctccgactacgccttcaacaaagcgcactccgcg
gcctacggcctggtgtcgtactggaccgcctatctcaaggctcactatccggccgagtac
atggccgcgctgctcaccagcgttggtgactcgaaggacaagatggccctgtacctcaac
gagtgcaggcgcatgggcatccgtgtcctcccgccggacgtgtccgagtccatcaacttc
ttcgccgctgtgggcgacgacatccgcttcgggctcggggcggtgcgcaacgttggaagc
aacgtggtcgacggcatcgtggaggctcgcaaggacggcgcgttcacctccttccacgac
ttcctcgacaaggtgccgctgcatgtggccaacaagcgcacggtcgaatcgctcatcaag
gccggagccttcgactcgatgggcgacacccgacgcgctctgctcgagatccacgaggat
gccgtcgaggcggcggtggaccggaagcggaacgaggctcagggagccatcgggttcgac
ttcgacagcctgtacgacggactcgaggagaccgctccgcccaaggtgcccgcccgtccc
gagtgggtcaagaaggacaagctcgccttcgagcgcgagatgctcgggctctacgtgtcc
gaccatccgctcgccggcctcgaagtcgcccttgccaagcacgcctcgatctcgatccac
gatctgaacaactccgaggacctgcaagacggagatcaggtgaccgtcgccggcctcgtc
acgagcgtccagcacagggtcgccaaagccagcggcaacccctacggcatgatcaccgtc
gaggacttcaacggtgaggtcaccgtgatgttcatgggcaagacctacaccgagttccag
cacatcctgcagcaggactcgatcctcgcggttcgcggacgtgtctcccggcgcgacgac
gggctgaacctccacgcgcagtcggcgttcgcgccggatgtcgggtcgttcgatgcgtcg
gggccgctctcgctcgtgctggctgaacagcgggccacagagagcgtcatgaccgacctc
gcagaggttctcaggcgccaccgcggcgataccgaggtcgtcctgcgggtgcaccggggc
ggaactgcgaaggtgttcgatgtgccgatgcccgtgaaggtgtcggctgacctgttcggc
gatctcaagtcgctgctcggcccgtcctgcctcggctga
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