Candidatus Micrarchaeum sp. A_DKE: Micr_00139
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Entry
Micr_00139 CDS
T07038
Symbol
gds_4
Name
(GenBank) Geranylgeranyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
miy
Candidatus Micrarchaeum sp. A_DKE
Pathway
miy00900
Terpenoid backbone biosynthesis
miy01100
Metabolic pathways
miy01110
Biosynthesis of secondary metabolites
Module
miy_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
miy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Micr_00139 (gds_4)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
Micr_00139 (gds_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
miy01006
]
Micr_00139 (gds_4)
Enzymes [BR:
miy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Micr_00139 (gds_4)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Micr_00139 (gds_4)
2.5.1.29 geranylgeranyl diphosphate synthase
Micr_00139 (gds_4)
Prenyltransferases [BR:
miy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Micr_00139 (gds_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QRF73624
UniProt:
A0A7U3CYL0
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All DBs
Position
complement(129992..131146)
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AA seq
384 aa
AA seq
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MKARMARKQRLLLSKTAKRCIAKYALKNPKVKPMATVEIRRERDQEVMSMISRMKGDVHS
EIIKAIKSIFVSQSRDIIEAPGLMDMLRYYPDSMGKYSRASIMMLSAMAAGADYKDCILP
AAAIQLFEDFALVHDDIEDGSLLRRGRKTIQTEYGTSRAINAGDMLHSAVEGLLYRVSKQ
KNGDAIYKKFREIGNITSIGQDKDIYYSGRNAIEATEEIYISIAADKTSAYSVYGPLQIG
ALIGGSGLVELQVLESIGLPAGIAFQINDDIKDVEGKVAGKGQYEDIRQGKATLIAINTY
KNSGPGEREIMESIYSKKPSNKDESDINYILGLIEKTGSIGYARNIRKEYEKSAVNALLN
SRDIIPENPYSEALMELIGTLYSE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaagaatggccagaaagcagcgattgcttctttcaaaaacggccaagagatgc
atagcaaaatatgcattaaagaatccaaaagtgaagccaatggcaaccgtggaaattaga
agggagcgcgatcaggaagtaatgagcatgatctcgaggatgaagggtgatgtgcattcc
gagataataaaagcaatcaaaagcatttttgtatcgcaatcaagagacataatcgaggca
cccggattgatggatatgctaaggtactatcccgattccatgggcaagtactccagagct
tctataatgatgctttctgcaatggctgcaggagccgattataaggattgcatactgcca
gcagcagccatacagctttttgaggattttgcgcttgttcatgacgatatagaggacgga
agcctgctgagaagaggaaggaaaacaatacagacagaatatgggaccagcagggcgata
aacgctggcgacatgctgcattccgcggtagagggactgctttacagggtatcaaaacag
aaaaacggggacgccatatataaaaaatttagggagataggcaacataacttccatagga
caggataaggatatatattactccggaagaaacgccattgaagccacggaagagatttac
ataagcatagcggctgacaaaacctcggcatacagcgtatacgggcccctgcagataggt
gcgctcataggcggatccgggcttgtagagctccaagttcttgagagcatagggctgcct
gcaggcatagccttccaaataaatgacgacataaaggatgtagagggaaaggttgccggt
aagggccagtacgaagacataaggcagggcaaagccacgttgatagcaataaacacttat
aaaaattcggggcccggagaaagggaaataatggaatccatatattcgaaaaagccttcg
aacaaggacgagagcgacataaattacatattgggccttattgagaaaacaggctcgata
ggatatgcgagaaatataagaaaagaatacgaaaagagtgccgtaaatgcactcctaaat
agcagggatataataccggaaaacccttattcagaagcccttatggagcttataggcacc
ctttattctgaataa
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