Candidatus Micrarchaeum sp. A_DKE: Micr_00192
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Entry
Micr_00192 CDS
T07038
Name
(GenBank) putative exosome complex RNA-binding protein 1
KO
K03679
exosome complex component RRP4
Organism
miy
Candidatus Micrarchaeum sp. A_DKE
Pathway
miy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Micr_00192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miy03019
]
Micr_00192
Messenger RNA biogenesis [BR:
miy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Micr_00192
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Micr_00192
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_6
ECR1_N_2
Cmr7b-like
KH_1
Motif
Other DBs
NCBI-ProteinID:
QRF73677
UniProt:
A0A7U3CYX8
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All DBs
Position
complement(174396..175019)
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AA seq
207 aa
AA seq
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MRQFVTPGEELPKDARRNEYVMLQNGKAYSNILGFYDSDKKDVIPLEGMWKPRIGDNVIG
VVEKPTKPGLYNVVLTEFVQGLIITSKFDSGPIFEANDIIEATVASVERKRLAILERPRK
LALGQTLYVKPVRIPRIIGKSETMANQIARLTGSRIIIGRNGIIWINGGNTELAIKAIKT
VESEAHTSGLTERIKSMLEAEAPVENR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagacagtttgttacacctggtgaagagctgcctaaagacgcgaggcgcaacgaatac
gtaatgctgcagaacggaaaggcttattccaacatactgggcttttacgacagcgacaag
aaggacgtgatacctcttgaaggcatgtggaagccaaggataggcgacaatgtcataggg
gtagttgaaaagcccaccaagcccgggctctacaacgtggtgcttacggaattcgtccag
ggattgataataactagcaagtttgactcggggccgatttttgaagccaacgacataata
gaggcaactgtcgccagcgtggagaggaagaggctggcaatacttgagaggccaaggaag
ctggcgctcgggcagacactgtacgtaaagcccgtgaggataccgcgcataataggcaag
agcgagactatggcaaaccagatagccaggctcacgggaagcaggataataataggcagg
aacggcataatatggataaacggaggcaacactgagctggcaataaaagcaatcaagacc
gttgaaagcgaagcccacactagcgggctgaccgaaaggattaagtcgatgcttgaagca
gaagcaccagtggaaaaccgctaa
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