KEGG   Candidatus Micrarchaeum sp. A_DKE: Micr_00269
Entry
Micr_00269        CDS       T07038                                 
Symbol
fen_2
Name
(GenBank) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
miy  Candidatus Micrarchaeum sp. A_DKE
Pathway
miy03030  DNA replication
miy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:miy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Micr_00269 (fen_2)
   03410 Base excision repair
    Micr_00269 (fen_2)
   03450 Non-homologous end-joining
    Micr_00269 (fen_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:miy03032]
    Micr_00269 (fen_2)
   03400 DNA repair and recombination proteins [BR:miy03400]
    Micr_00269 (fen_2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:miy04147]
    Micr_00269 (fen_2)
DNA replication proteins [BR:miy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Micr_00269 (fen_2)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Micr_00269 (fen_2)
DNA repair and recombination proteins [BR:miy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Micr_00269 (fen_2)
Exosome [BR:miy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Micr_00269 (fen_2)
SSDB
Motif
Pfam: XPG_I XPG_N HHH_5 5_3_exonuc DUF5616 PaaA2
Other DBs
NCBI-ProteinID: QRF73752
LinkDB
Position
234914..235963
AA seq 349 aa
MAVDLSKLIIREKISLKELSGKTVAIDAYNVLYQFLSIIRQPDGTPLKDSKGRVTSHLSG
LFYRSIDLIQNGITPIYVFDGIPSKLKMKTIEARTRRRDNAYNAWLEAKAQGALEAARTY
AQESTRVDKAIVSSAKQLLDLMGIAQLTSTGEGEAQASYMCREGLVDAAASQDYDTLLFG
APVIIRNLTLSGRRKLPKKNVYVEVEPERVILAETLKALGISRQQLIWIGIMLGNDFNDG
IKGIGPKTALKIAMESKSISDVESIVEQKFKTPFQTDIREVEELFNNPDVKRIEKPELEK
MVSAKPDIEGIKRMMCDDYEFSEARIVKFAELLAKKRDSSRQEGISKWF
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcggtagaccttagcaaactcataatcagggagaagatatcgctcaaggagctaagc
ggcaaaacggtggcaatagacgcatacaatgtgctctaccagtttctttcaataataagg
cagccggacggcacgccgctaaaggattccaagggtagggtaacaagccacctatctggg
cttttctacaggagcatagacctgatacaaaacgggataactcctatatacgtgtttgac
gggataccgtcaaagctcaaaatgaagaccatagaagcaaggacaaggaggagggacaat
gcctacaacgcgtggcttgaggcaaaagcgcagggggcccttgaagcggcaaggacatac
gcgcaggaaagcaccagggtggacaaggcaatagtgtccagcgccaaacagctactggat
cttatgggcatagcgcagcttacctctactggcgagggcgaggctcaagcgagctacatg
tgcagggagggccttgttgacgcagctgcaagccaggattacgacaccctgctcttcggc
gcccctgtgataataaggaaccttacgctttccggaaggcgcaaactccccaaaaagaac
gtttatgtagaggttgagcctgagcgcgtgatactggccgaaaccctcaaagcccttgga
atatcaaggcagcagctcatatggataggcataatgcttggaaacgatttcaacgacggc
ataaagggcataggcccgaagactgcgctcaagatagcgatggaatcaaaaagcataagc
gacgtggagtcaatagttgagcagaagttcaagactcccttccagaccgacatacgcgag
gtcgaggagctgttcaataatccggatgtcaaacgcatcgagaagccggagctggagaaa
atggtctcggcaaagcccgatatagaaggcataaagcgcatgatgtgcgacgattacgag
ttttccgaagctcgtattgtcaagtttgccgaactcctggccaaaaagagggattcgtca
aggcaggaaggcatatccaagtggttctga

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