Mycobacteroides immunogenum: BAB75_22060
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Entry
BAB75_22060 CDS
T04755
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
miz
Mycobacteroides immunogenum
Pathway
miz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
miz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAB75_22060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miz03021
]
BAB75_22060
03400 DNA repair and recombination proteins [BR:
miz03400
]
BAB75_22060
Enzymes [BR:
miz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAB75_22060
Transcription machinery [BR:
miz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAB75_22060
DNA repair and recombination proteins [BR:
miz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAB75_22060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ANO05677
UniProt:
A0A0N0KLV1
LinkDB
All DBs
Position
complement(4451525..4455472)
Genome browser
AA seq
1315 aa
AA seq
DB search
MLDVNFFDELRIGLASADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDELRHNELSTLEAEMEVEKKAVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRSQRELDRLDEIWTTFTKLATKQLIVDEVL
YRELVDRYGEYFTGAMGAEAVQKLIQTFDLDAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQNSTNSPGGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTEIPGDTGAHV
PAAKDQPEEGVYSSPAEAIMAMDRGALSVRAPIRVRLTQQRPPAEVEAELFENGWQPGDA
WVAETTLGRVLFNELLPHGYPFVNKQMHKKVQSAIINDLAERFPMIVVAQTVDKLKDAGF
HWATRSGVTVSMADVLVPPQKAEILDRYEKEAERIEKQYQRGALNQQERRDALVKIWQEA
TDEVGKALEEHYPADNPITLLPKSGATGNMTQVRNLAGMKGLVTNPKGEYIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGINVTI
AEKQADGTLIRDAHIETSAYARTLAADAVDADGNVLVERGHDLGDPAIEKLLAAGVTTVK
VRSVLTCTTGTGVCAMCYGRSMATGKLVDIGEAAGIVAAQSIGEPGTQLTMRTFHQGGVG
DDITGGLPRVTELFEARVPKGKAPIADVTGRVRLEEGERFYKITIVPDDGGEEVVYDKLS
KRQRLRVFKHEDGSERPLADGDHVEVGQQLMEGAADPHEVLRVMGPRQVQVHLVNEVQEV
YRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFESENRRVVAEGGEPA
AGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDRLNGLKENVIIGKLIPAG
TGINRYRNISVQPTEEARAAAYTIPSYEDQYYSPDFGSNTGAAVPLDDYGYSDYR
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgatgaactccgtatcggcctcgcgtcggcggatgacatc
cgtaactggtccttcggcgaagtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggacctactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgccccg
gtcacgcacatctggtacttcaagggtgttccgtcgcgccttggctacctgctggacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtcatcacctcggtcgac
gacgagctccgccacaacgagctctcgacgcttgaggccgagatggaggtcgagaagaag
gccgtcgccgatcagcgtgacgccgacctggaggcccgtgcccagaagctcgaggccgac
ctggccgagctggaggccgagggtgccaagtccgacgtgcgccgcaaggtgcgtgacggt
ggcgagcgcgagatgcgtcagctccgcgatcggtcgcagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctaccaagcagctgatcgtcgatgaggtgctc
taccgcgagctggtggatcgctacggcgagtacttcaccggcgccatgggtgccgaggcc
gtgcagaagctgatccagaccttcgatctcgacgccgaggccgagaacctgcgcgagacc
atccgcagcggcaagggacagaagaagctgcgcgccctcaagcgcctgaaggtggtggcg
gcgttccagaactccaccaactcacccggtggcatggtgctggacgcggtgccggtgatc
ccgccggagctgcgcccgatggttcagctcgacggtggccgcttcgcgacctccgatctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgatctg
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggccgtcgtggacgtccggtcaccggaccgggtaaccgtccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctcggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgc
gcccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacctacgctgcaccgcctgggtatccaggccttcgagccgcagctggtggaaggcaag
gcaattcagctgcacccgctcgtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcggaggcgcaggccgaggctcgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggtcgcccgctggccatgccccgtctggac
atggtgaccggtctgtacttcctgaccaccgagatccccggcgacaccggtgcacacgtg
cccgccgccaaggatcagccggaggagggcgtgtacagctcgcccgccgaggccatcatg
gcgatggaccgcggtgcgctgagtgtccgggcacctatccgggtgcggctgacgcagcag
cgtccgccggccgaggttgaggccgagctgtttgaaaacggttggcagccaggtgatgcc
tgggtcgccgagaccacgctcggccgcgtgctgttcaacgaactgctgccccacgggtac
ccgttcgtgaacaagcagatgcacaagaaggtgcagtcggcgatcatcaacgatctcgcc
gagcggttcccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgccggtttc
cactgggccacgcgttcgggagtcacggtctccatggccgacgtgctggtgccgccgcag
aaggcggagatcctcgaccgctacgagaaggaagcggagcggatcgaaaagcagtaccag
cgtggtgctttgaaccagcaggagcgtcgcgacgcgctggtcaagatctggcaggaagcc
accgacgaggtcggtaaggcgctggaggagcactacccggccgacaacccgatcaccttg
ctgcccaagtccggcgcgaccggaaacatgacccaggtgcgcaacctggcgggcatgaag
ggtctggtgaccaacccgaagggtgagtacatcccgcgtccgatcaagtcctcgttccgt
gagggcctgaccgttctcgagtacttcatcaacacgcacggcgctcgtaagggtctcgcc
gataccgcgctccgtaccgctgactcgggttacctgacccgtcgtctggtggacgtctcg
caggacgtcatcgtccgcgagcacgactgcggcaccgagcgtggcatcaacgtgaccatc
gccgagaagcaggccgacggcacgctgatccgcgatgcgcacatcgaaacctccgcctac
gcacggactctcgccgccgacgcggtggatgccgatggcaacgtgctggtggagcgtgga
cacgacctgggtgacccggcgatcgagaagctgctcgccgcgggtgtcaccacggtcaag
gtccggtcggtgctcacctgcaccaccggcaccggggtctgcgcgatgtgctacggccgc
tcgatggcgaccggcaagcttgtcgacatcggcgaggcggcgggcatcgtggccgcccag
tcgatcggtgagcccggtacccagctgaccatgcgtacgttccaccagggtggcgtcggt
gacgacatcaccggtggtctgccgcgtgtcaccgagctgttcgaggcgcgagttcccaag
ggcaaggcgccgattgccgacgtcaccggacgggtgcgcctggaagagggcgagcgcttc
tacaagatcaccatcgtcccggacgatggcggcgaggaagtcgtctacgacaagctctcc
aagcgtcagcgtctgcgcgtcttcaagcacgaagacggctccgagcgtccgctggccgac
ggcgaccacgtcgaggtcggacagcagctgatggaaggtgcggccgatccgcacgaggtg
ctccgcgtgatgggtccgcgtcaggtgcaggtgcacctggtcaacgaggttcaggaggtg
taccgcagccagggtgtgtcgatccacgacaagcacatcgaggtcatcgtgcgccagatg
ctgcgccgcgtgacgatcatcgactcgggcgcaacggaattcctgcccggctcgctcacc
gagcgtggcgagttcgagtcggagaaccgtcgcgtggtggccgagggcggcgagcccgcg
gccggccgtccggtgctgatgggtatcaccaaggcatcgctggccaccgactcgtggctg
tcggcggcgtccttccaggagaccactcgcgtgctgaccgatgcggccatcaactgccgc
agcgacagactgaatggtctgaaggagaacgtcatcatcggtaagttgatcccggccggt
accggtatcaaccgctaccgcaacatctcggtgcagccgaccgaagaggcgcgggccgcg
gcgtacacgatcccgtcgtacgaggatcagtactacagccccgatttcggttccaacacc
ggtgctgcggtgccgctggacgactacggatacagcgactaccgctag
DBGET
integrated database retrieval system
