KEGG   Methanocaldococcus jannaschii: MJ_0396
Entry
MJ_0396           CDS       T00003                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit E'' (rpoE2)
  KO
K15171  transcription elongation factor SPT4
Organism
mja  Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:mja00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    MJ_0396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mja03021]
    MJ_0396
   03019 Messenger RNA biogenesis [BR:mja03019]
    MJ_0396
Transcription machinery [BR:mja03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     MJ_0396
  RNA polymerase I system
     MJ_0396
Messenger RNA biogenesis [BR:mja03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     MJ_0396
SSDB
Motif
Pfam: Spt4 RecR_ZnF CARD zn-ribbon_14 Rtf2 RUBY_RBDX Zf_2nd_IFT121
Other DBs
NCBI-ProteinID: AAB98386
UniProt: Q57839
Structure
LinkDB
Position
complement(357795..357974)
AA seq 59 aa
MRACLKCKYLTNDEICPICHSPTSENWIGLLIVINPEKSEIAKKAGIDIKGKYALSVKE
NT seq 180 nt   +upstreamnt  +downstreamnt
atgagagcatgtttaaaatgtaaatacttaacaaatgatgaaatatgtccaatatgccac
tctccaacaagtgaaaactggatagggcttttaatagttataaatccagagaaatcagag
attgctaaaaaggcaggaatagatattaaaggaaagtatgcattaagtgtgaaagagtag

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