Methanocaldococcus jannaschii: MJ_0782
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Entry
MJ_0782 CDS
T00003
Name
(GenBank) transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
mja
Methanocaldococcus jannaschii
Pathway
mja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MJ_0782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mja03021
]
MJ_0782
Transcription machinery [BR:
mja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MJ_0782
Prokaryotic type
Archaeal type
TFB
MJ_0782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Intein_splicing
Zn_Ribbon_TF
LAGLIDADG_3
Sigma70_r4
Lar_restr_allev
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
Zn_ribbon_3
TMIE
HTH_Tnp_ISL3
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AAB98771
UniProt:
Q58192
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(703765..705786)
Genome browser
AA seq
673 aa
AA seq
DB search
MVWLMEALKTKENETTKEKKLTTKVEKSEKKEENVREEEIVCPICGSKEVVKDYERAEIV
CAKCGCVIKEKLFDIGPEWRAFDHEQKIKRCRVGAPMTYSVDYNEPIIIKENGEIKVVKI
GELIDKIIENSENIRREGILEIAKCKGIEVIAFNSNYKFKFMPVSEVSRHPVSEMFEIVV
EGNKKVRVTRSHSVFTIRDNEVVPIRVDELKVGDILVLAKELPNIEEDIEIDKKFSKILG
YIIAEGYYDDKKIVLSYDYNEKEFINETIDYFKSLNSDITIYSKDLNIQIEVKNKKIINL
LKKLRVKNKRIPSIIFKSPYEIKKSFIDGIFNGKDAKVFVSKELAEDVIFLLLQIKENAT
INKKSINDIEVYEVRRITNIYTNRKLEKLINSDFIFLKIKEINKVEPTSGYAYDLTVPNA
ENFVAGFGGFVLHNTIHDKGLSTVIDWRNKDSYGKDLSANKRAQLYRLRKWQRRIRVSDA
AERNLAFALSELDRITSKLGLPRHVRENAAIIYRGAVEKGLIRGRSIEGVVAAAIYAACR
RCRVPRTLDEIAEASRVDRKEIGRTYRFLARELNIKLTPTNPIDYVPRFASELGLPGEVE
SKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQREVAEVAGVTEVTIRNRY
KELTEHLDIDVTL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggcttatggaggctctcaaaaccaaagaaaatgaaacaacaaaagaaaaaaaa
ctcacaacaaaagttgaaaaatctgaaaaaaaagaagaaaatgttagagaggaagagatt
gtttgtccaatttgtggtagtaaagaagttgttaaagattatgaaagggctgaaatagtc
tgtgctaaatgtggatgtgttatcaaagaaaaattatttgatattggaccagaatggagg
gcatttgaccatgagcaaaagattaaaagatgtagagttggagctcctatgacttatagt
gttgattacaacgaaccaataatcattaaagagaatggagaaataaaagttgttaaaatt
ggagaacttatagataaaattattgaaaactcagagaatattagaagagagggcatctta
gagatagcaaaatgtaaaggtattgaagttattgcctttaacagcaattacaaatttaaa
ttcatgcctgtttcggaggtttcaaggcatccagttagtgagatgtttgaaatagttgtt
gaagggaataaaaaggttagagttaccagaagccatagtgtctttaccataagagataat
gaggtagttccaataagagttgatgagctaaaagttggagatatattagttttagcaaaa
gaattgccgaatattgaagaagatattgaaatagataaaaaatttagtaaaatattgggt
tacataattgcggaaggttattatgatgacaaaaaaattgtattatcttatgattacaat
gaaaaagagtttataaatgaaacaattgattatttcaaatctttgaattcggatataacc
atctatagtaaagatttaaatattcaaattgaagtaaagaataaaaaaattatcaattta
ctaaaaaaattgagagttaagaataaaagaattccctctataatctttaaatctccttat
gaaataaaaaaatcattcatagatgggatatttaatggtaaagatgcaaaagtatttgtc
tcaaaggagttggctgaagatgttatattcttacttttacaaataaaagaaaacgccacc
attaataaaaagagtataaatgatattgaagtttatgaggtaaggagaataacaaatata
tataccaatagaaaactcgaaaaacttataaactctgatttcatattcttaaaaattaaa
gagattaataaggtagagccaaccagtggatatgcctatgatttaactgttccaaatgca
gaaaacttcgttgctggatttggaggatttgtattacacaacaccatccacgataaaggt
ttatcaacagttattgattggagaaacaaagatagttatggaaaggatttatctgcaaat
aagagagcccaactctacagattaagaaaatggcagaggagaattagagtcagtgatgct
gcagagagaaacttagcatttgccctgtcagaattagatagaattacatcaaagctcgga
ctaccaagacatgtaagagagaatgccgctataatttatagaggggctgttgagaaagga
ttaataagaggaagaagtattgaaggagttgttgcagccgctatatacgctgcttgcaga
agatgtagagttccaagaactttagatgaaattgccgaagcatcaagggtggataggaaa
gaaattggaagaacttacagatttttagcgagagaattaaatataaaattaaccccaaca
aatccaattgattatgtgccaagatttgcatctgaacttggattgcctggggaagttgag
tccaaagctatacagatattgcaacaagcggctgaaaaaggattaacaagcggtagaggc
cctactggtgttgctgctgcagcaatatatatagcaagcgttcttcttggctgtagaaga
actcagagggaagttgctgaagttgctggagtgacagaagtaacaataagaaatagatac
aaggaactaaccgagcatttggatattgatgtaactctgtag
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