Methanocaldococcus jannaschii: MJ_1028
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Entry
MJ_1028 CDS
T00003
Name
(GenBank) DNA topoisomerase VI, subunit B (top6B)
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
mja
Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mja03032
]
MJ_1028
Enzymes [BR:
mja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MJ_1028
DNA replication proteins [BR:
mja03032
]
Prokaryotic type
DNA Topoisomerases
MJ_1028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
Med29
XPA_C
Costars
Motif
Other DBs
NCBI-ProteinID:
AAB99032
UniProt:
Q58434
LinkDB
All DBs
Position
959553..961613
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AA seq
686 aa
AA seq
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MININMTILNFIYHFQHKSLICKISLMVGFMGDELFKEFKEHSVAEFFRKNKHMLGYSGK
IRSLTTIIHELVTNSLDACEEAGILPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVF
GKMLAGSKMHRFIQSRGQQGIGAAGVLLFSQITTGKPLKIITSTGDGNIYEVEVKMNVEK
NEGEIVSKKVRKGKWRGTRVEGEFKEVSYNRGEFGPFEYLRRISLATPHAKIVLKDPYGE
VVFDRVVNELPKKPEEMKPHPYGLTTDELLYIARKTKSKKVSSMLVSELSRVTTKRIKEL
INYMLRDLILKKFKDSVFWNMVVSCYLNIDIESYLNKFKDYITDDEIETVRMLIKNLPES
LDELKRYALKYITMEYLFNKLSEEEINKLKNHFKKIPENFMEWAEKNYLSATVVDELNKK
VKNIVKNPEEFIAEIKNKGLISDEELKKFEDEVKSILNKNPKELTWDEAEMIVNCLQSME
FMAPPTTGLRPIGAENIEKSLKELLQPDFVKAITRNPKTYKGGIPFAVEVAIAYGGNAGR
QGDEGRRMEIMRFANHVPLLYDASACGLTKAVKSINWKRYGLRGEDAPITVFVNLISTFI
PYTSAGKQAVACSENENEEIYNEIRHALMICGRELEKYLSRIRREAEEEKKRKYVMKYAR
IFAEALANILNKPVDEIEEKVVKLLE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
ttgataaatataaatatgacaattttaaattttatatatcattttcaacataaaagctta
atttgcaaaataagtttaatggtgggattcatgggagatgaattatttaaagaatttaaa
gaacattcagttgctgaattttttaggaaaaataaacacatgcttggatacagtggaaaa
attagaagtttaacaactataatccatgaattggttacaaacagcttagatgcatgtgaa
gaagccggcattttgccagatataaaagttgagattgagaagttaggagctgaccactat
aaagtggcagttgaagacaacggtcctggaattcctttagaattcatcccaaaggtattt
ggaaagatgttagctggttctaagatgcataggtttattcaatcaagaggacagcaggga
attggggctgctggagttctgctattttcacaaataaccactggaaagccgttaaaaatt
ataacatcaactggagatggcaatatctatgaagttgaagtaaagatgaatgttgagaaa
aacgaaggagaaattgtatcaaaaaaagtaagaaaaggaaaatggagaggaacaagagta
gagggagagtttaaagaagttagctacaacagaggagagtttggaccttttgaatatttg
aggagaataagtttagcaacaccacacgcaaaaattgtattaaaagacccttatggagag
gttgtatttgatagggttgttaatgaactgcctaaaaaaccagaggagatgaaacctcat
ccttatggtttaactaccgatgaactattatatattgcaagaaagacaaaatcaaagaaa
gtttcttcaatgctcgtctctgaactttcaagagttacaacaaaaagaattaaagagctt
ataaattacatgcttagagatttaatattaaagaaatttaaagatagtgtattttggaac
atggttgtttcttgctatttaaatatagatattgagagctatctaaataaatttaaagat
tatattaccgatgatgagatagaaaccgttagaatgttaattaaaaaccttccagagagc
ttagatgaattaaagagatacgctttaaagtatataacaatggaatatttatttaataag
ctaagtgaagaggagataaacaagttaaagaaccactttaagaagatacctgaaaacttt
atggaatgggctgaaaagaactatttatcagctacagttgttgatgaattaaacaaaaaa
gttaaaaatatagttaaaaatccagaagaatttatcgctgaaataaaaaataaaggacta
atatctgatgaagaactaaaaaaatttgaggatgaagtcaaaagcatattaaataaaaat
cctaaggaattaacttgggatgaggcggaaatgattgttaattgtcttcaaagtatggaa
tttatggctcctccaacaacaggattaagacctattggagcagagaatatagaaaaatca
ttaaaagagcttttacagccagattttgttaaggcaattacgagaaatccaaaaacttat
aaaggaggaattccattcgctgttgaagttgctattgcctatggaggaaacgctgggagg
cagggagacgaaggaagaagaatggagattatgagatttgctaaccacgttcctttgctg
tatgatgcctcagcctgtggtttaactaaggcagttaagagtataaattggaagaggtat
gggttgagaggagaagatgcaccaataacagtgtttgttaatctaatatctacgtttatc
ccttacacttcagcaggaaagcaggcagttgcttgtagtgaaaatgaaaatgaagaaatt
tataatgaaattagacatgcgttgatgatttgtggtagagaattagagaaatatttatca
agaattagaagagaggctgaagaagagaaaaagagaaagtatgttatgaagtatgcaaga
atatttgctgaggcattggctaatatattaaataaaccagttgatgagattgaagagaaa
gttgttaagttgttagaataa
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