Methanocaldococcus jannaschii: MJ_1040
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Entry
MJ_1040 CDS
T00003
Name
(GenBank) DNA-directed RNA polymerase, subunit B'' (rpoB2)
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mja
Methanocaldococcus jannaschii
Pathway
mja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MJ_1040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mja03021
]
MJ_1040
Enzymes [BR:
mja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJ_1040
Transcription machinery [BR:
mja03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MJ_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AAB99043
UniProt:
Q58444
LinkDB
All DBs
Position
971005..972501
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AA seq
498 aa
AA seq
DB search
MAIMRELVDAYFKEHGLIDHQIESYNDFVENRLQKIIDEVGYIETEITGGYKVKLGKIKV
GKPVIKEADGSIRPITPMEARIRDLTYSVPLYLEMTPIIGEGEDAREGETVEVYIGELPV
MLGSKICHLYGKSREELIDLGEDPEDPFGYFIINGTEKVLITQEDLIPNRILCEKAERSG
KIVDVAKVFSTRHGFRALCTVERHPDGLLYATFPGMPGQIPLVILMKALGAETDKDIIES
IDDERFFMEIVLNIQEIREEHNINSPEDALEFIGKRVAPGQAKDYRLKRAETVLCNYLLP
HLGVTKEDFPKKIRFLGIMARNALELYFGYRGEDDKDHYAYKRAKLAGDLMEDLFRYAFS
QLVKDIKYQLERQTLRNKTPSIQAAVRSDILTERIKHAMATGTWVGGKTGVSQLLDRTSY
LATNSQLRRIVSPLSRSQPHFEARELHGTHWGKICPSETPEGPNCGLVKNFAIMCKVTRE
EDDSKVIELLKSFGINVS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggcaattatgagagaattagtagatgcttattttaaagaacatggtttaatagaccac
cagatagagtcatacaacgattttgtagaaaatagattacaaaaaattattgatgaagtt
ggatatattgaaacagagattactggagggtataaagttaaattagggaaaattaaagta
ggaaaaccagttattaaagaagctgatggttcaataagaccaataactccaatggaagca
agaatcagagatttaacatattcagttccattatatttagaaatgacccctattattggt
gaaggagaagatgcaagggaaggggaaactgttgaagtttatatcggagaacttccagta
atgcttggttcaaaaatctgccacttgtatggaaaatcaagagaagagcttatagacctg
ggagaagaccctgaagacccatttggctattttataattaatggaactgaaaaagtatta
attactcaggaagatttaattccaaatagaattttatgtgagaaggcagagagaagtgga
aagatagtagatgttgcaaaagtgttttcaacaagacacggatttagggctttatgtact
gttgaaagacatccagatggtttgttgtatgctacattccctggaatgcctgggcagata
ccattggttatattaatgaaagcacttggggctgagacagataaagatatcattgagtca
attgatgatgaaagattctttatggagattgttttaaacattcaagagattagggaagag
cataacataaactcccctgaagatgctttggagtttattggaaagagagtagctccaggg
caggcaaaggattatagattaaagagagcagaaacagttttatgtaactatttactgccc
catttaggagttacaaaagaagatttcccaaagaaaattaggttcttaggaataatggca
agaaacgctttagaactttactttggatatagaggagaagatgataaagaccactacgca
tataaaagagctaaattagctggggacttaatggaagatttgtttagatatgcgtttagc
caacttgttaaggatataaaatatcaattagagagacaaacattaaggaacaaaactcct
tcaattcaagctgctgtaaggagcgatatattaaccgagagaattaaacacgctatggca
acaggaacatgggttggaggaaaaactggggttagccagctcttagatagaacaagttac
ttagcaacaaactctcaattgaggagaatagtttcaccattatcaaggtcacagccacac
tttgaagcgagagaactgcatggaactcattggggtaaaatctgcccttcagaaactcca
gaaggtccaaactgtggtcttgttaaaaactttgctataatgtgtaaagttacaagagaa
gaagatgatagcaaagttattgagctattaaaatcctttggaataaatgtttcttaa
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