Methanocaldococcus jannaschii: MJ_1124
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Entry
MJ_1124 CDS
T00003
Name
(GenBank) putative SKI2-family helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mja
Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mja03400
]
MJ_1124
Enzymes [BR:
mja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJ_1124
DNA repair and recombination proteins [BR:
mja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MJ_1124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_dom4_arc
Intein_splicing
LAGLIDADG_3
ResIII
HHH_5
DEXQc_Suv3
DNA_pol_lambd_f
HTH_61
SNF2-rel_dom
LAGLIDADG_WhiA
Hint
Motif
Other DBs
NCBI-ProteinID:
AAB99126
UniProt:
Q58524
LinkDB
All DBs
Position
1062438..1066025
Genome browser
AA seq
1195 aa
AA seq
DB search
MDKILEILKDFGIVELRPPQKKALERGLLDKNKNFLISIPTASGKTLIGEMALINHLLDG
NKNPTNKKGIFIVPLKALASEKYEEFKSKYERYGLRIALSIGDYDEDEDLSKYHLIITTA
EKLDSLWRHKIDWINDVSVVVVDEIHLINDETRGGTLEILLTKLKEFNVQIIGLSATIGN
PDELAEWLNAELIVDDWRPVELKKGIYKNEAIEFINGEIREIKAVDNNDIYNLVVDCVKE
GGCCLVFCNTKRNAVNEAKKLNLKKFLTEEEKIRLKEIAEEILSILEPPTEMCKTLAECI
LNGSAFHHAGLTYQHRKIVEDAFRKRLIKVICCTPTLCLNANTEILQESGFRKITELNKD
EKVFALCGKEIKPVDGWKVHKTPQHEYNIVVKTVNGLEITTTPNHIFLVKENGSLKEKEA
KDLKVGDYVATVDRIRVKEKDIDLSNGDLYFIGYFIGDGYTGVIEKNTLKATPDLAFNPK
YPPNFDDSELHKKYFLKCRISKGVAHYIYSKKLRKIFNKLNMLTKDNKNIDAFCNLPLDK
LAYLIAGLFDSDGYIYLNRKNIEFYSISEKLVEQLQFVLLRFGIHSSIRKKKTKTMVSPT
NGKEYKCKDIYVLTIRDFMSIKRFYENIPLRHEEKRRKLEEIIKNKEIGQIPSEFVALRF
TPIAKIWCDCGFSVDLTMFKPRTKRQRELNKKRVKLLFELLDGKKLITNYKEYYSKRKNP
YFDFIVREKINGNNYYSLNEKGRVLMSLLNKHIKDKENLEEMYNFLVNLEKCPICGKPIH
KEMRYSWKKECYDGDIYWDRIKEIKKIKVNDKYAYDIELPDDGSNSHYIVANGFIVHNSA
GLNLPCRRAIVKDLTRFTNKGMRYIPIMEIQQCIGRAGRPGLDPYGEGIIVAKNDRDYLR
AYQALTQKPEPIYSKLSNQAVLRTQLLGLIATGEIRDEYDLEWFIRNTFYAHQYGNLREV
AKNINEVIRFLEENEFIIDFMPTELGKRVSELYIDPLSAKFIIDGLEEMENEEEIYYLYL
ISKTLEMMPNLRVYNSEELNLIDEMDSLGIKSFEIEDLEAFKTAKMLYDWINEVPEDEIL
KRYKIEPGILRYKVENAVWIMHALKEIAKLIGKSSDIPEKLEIRLEYGAKEDIIELLSIK
YIGRVRARKLYNAGIRSIEDIINNPSKVASIIGEKIAKKILDELGVKFGQQKLSF
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcttagagattttaaaggattttggcattgtagagctaaggccaccacag
aaaaaggcattggaaagaggattattggataagaataaaaattttttaatatctattcca
acagcatctggaaaaacactaattggagagatggctttaataaatcacttattggatggg
aataaaaatcctacaaacaaaaagggtatcttcatagtgcctttaaaggcattggcatca
gagaagtatgaggagtttaaaagcaaatatgagcggtatgggttgagaatagccttatca
ataggggattatgatgaagatgaggatttaagcaaatatcatttaattataacgacagct
gagaaacttgactctctatggagacataaaattgactggattaatgatgtttctgttgtt
gtggttgatgaaattcatctaattaatgatgaaacaagaggagggacgttagagatttta
ttgactaaattaaaagagttcaatgtacaaattattggtttatctgcaactattggaaat
ccagatgagttggctgagtggcttaatgctgagcttatagttgatgattggagacctgtt
gagttgaaaaaaggcatttacaaaaatgaagccatagagtttataaatggagaaattaga
gagataaaggcagttgataataacgatatttacaacttagttgttgattgtgtaaaggaa
ggaggatgctgtttagtattctgcaacaccaaaagaaatgccgttaatgaggcaaagaaa
ttaaatttaaagaaatttttaactgaagaggaaaaaataagattaaaagaaatagctgaa
gagattttatctatcttagagccaccaactgagatgtgtaaaaccttagctgaatgcatc
ttaaacggctctgcctttcatcatgctggtttaacttatcagcatagaaagattgttgaa
gatgcgtttagaaagaggttaattaaggttatctgttgcactcctacactctgcctaaat
gcaaacactgaaatactgcaagagagcggatttaggaaaattactgaattaaataaagac
gaaaaagtctttgcattatgtggaaaggagataaaaccagtagatggttggaaagtccat
aaaactccacagcatgaatacaacatcgttgtaaaaacagtaaatggtttagaaatcact
acaactccaaatcatatatttttagttaaagaaaatggttctttaaaagaaaaagaggca
aaggatttaaaagttggagattatgtagcgacagttgatagaataagagttaaggagaaa
gatattgatttatctaatggagacctttatttcattggatatttcataggagatggttat
accggagttatagaaaaaaatactcttaaagccactccagaccttgcatttaatccaaaa
tatcccccaaattttgatgattctgaacttcacaaaaaatactttttgaaatgtagaata
tcaaaaggtgttgctcattatatatactcgaaaaaactaagaaaaatctttaataaatta
aatatgctcacaaaagataacaaaaacattgatgcattttgtaatcttccattggataag
ttagcatatcttattgcaggattgtttgatagtgatggatatatatacttaaatagaaaa
aacattgaattctattcaatatctgaaaaattggttgaacaattacagtttgtattgtta
agatttgggattcatagcagtattagaaaaaagaaaactaaaactatggtatctccaaca
aatggcaaagaatacaaatgtaaagacatttatgtattaacaattagagattttatgagt
ataaaaagattttatgagaacatcccactaagacatgaagagaagagaagaaaattagaa
gaaatcataaaaaataaagaaattggacaaattccttcggaatttgtagctctccgcttc
actccgattgccaaaatatggtgtgattgtggatttagtgttgatttgaccatgtttaaa
ccaagaactaaaaggcagagagagttaaataaaaaacgtgtaaaattactttttgaacta
ttggatggaaaaaaattaattacaaactataaagaatattattcaaagagaaaaaatcct
tattttgactttattgtaagagaaaaaattaatggaaacaattattactctttaaatgaa
aaaggcagagttttaatgagtctcctaaataaacacataaaagataaagaaaacttagaa
gagatgtataactttttagtaaatctcgaaaaatgtccaatttgtggtaagccaattcat
aaagagatgagatatagctggaaaaaagaatgctatgatggagacatttattgggataga
attaaagaaattaaaaagataaaagtaaatgacaagtatgcctatgacatagaactgcca
gacgatggaagcaacagccattatattgtggcaaatggatttatagtgcataactctgct
gggctgaacttaccgtgtagaagggcaatagttaaagacttaacaagatttacaaataaa
gggatgagatacatcccaataatggaaatccaacaatgtataggaagagctggaagacca
ggattagacccatatggagaagggataatcgtagcaaagaatgatagagattatttaagg
gcttatcaggcattgacgcaaaaaccagagccaatatattcaaagctctcaaatcaagca
gttttaagaactcaacttttaggacttattgctactggagagattagagatgagtatgat
ttagaatggtttataagaaataccttctatgctcatcaatatggaaatttgagggaagtt
gctaaaaatattaatgaagtcattagatttttggaagagaatgagtttattattgatttt
atgccaacagaattaggaaagagagtttctgaactctacatagacccattgtcagctaaa
ttcatcatagatggattggaagagatggagaatgaagaagagatttattatctctaccta
atttcaaaaaccttggagatgatgccaaatttaagagtttataactctgaagagttaaat
ttaattgatgaaatggactctcttggaataaaaagctttgagattgaggatttagaggca
tttaaaacagctaagatgctgtatgattggattaatgaagttccagaagatgaaatttta
aagagatataagattgaaccagggattttgagatataaggttgaaaatgctgtttggata
atgcatgcattaaaagagattgctaaattaattggtaaaagctcagacattccagagaag
ttggagataaggttagaatatggagctaaggaagatattattgagttgttgagcataaag
tatattggaagggttagagcaagaaagctgtataatgctggaattagaagtattgaggat
attataaacaacccttcaaaagtggcttcaattattggagaaaaaatagctaaaaagatt
ttggatgagttgggagttaaatttggacagcaaaaactaagtttttaa
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