Methanocaldococcus jannaschii: MJ_1156
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Entry
MJ_1156 CDS
T00003
Name
(GenBank) cell division control protein 48 (cdc48), AAA family
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mja
Methanocaldococcus jannaschii
Pathway
mja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MJ_1156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mja03019
]
MJ_1156
03009 Ribosome biogenesis [BR:
mja03009
]
MJ_1156
04131 Membrane trafficking [BR:
mja04131
]
MJ_1156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mja04147
]
MJ_1156
Messenger RNA biogenesis [BR:
mja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MJ_1156
Ribosome biogenesis [BR:
mja03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MJ_1156
Membrane trafficking [BR:
mja04131
]
SNARE
SNARE associated proteins
Others
MJ_1156
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MJ_1156
Exosome [BR:
mja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MJ_1156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
TIP49
AAA_14
AAA_33
AAA_22
Vps4_C
AAA_28
nSTAND3
IstB_IS21
DUF815
AAA_18
Sigma54_activat
Mg_chelatase
AAA_7
RNA_helicase
AAA_17
AAA_24
ABC_tran
Zeta_toxin
PhoH
AAA_3
TsaE
Sigma54_activ_2
AAA_lid_PRS2_C
NB-ARC
Parvo_NS1
ATP-synt_ab
AAA_30
NPHP3_N
SLFN-g3_helicase
bpMoxR
ATPase
ResIII
AFG1_ATPase
Baculo_PEP_C
DUF6674
Allexi_40kDa
Molydop_binding
DUF2383
Baculo_p24
COG5_C
TMP_3
Glutaredoxin2_C
DinB
DUF2203
DUF1572
DUF4259
DUF5798
Motif
Other DBs
NCBI-ProteinID:
AAB99153
UniProt:
Q58556
LinkDB
All DBs
Position
complement(1094408..1097119)
Genome browser
AA seq
903 aa
AA seq
DB search
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAG
KGIIRIDGYLRQNAGVAIGDRVKVKRVEIKEAKKVVLAPTQPIRFGPGFEDFVKRKILGQ
VLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKETKVPDVTYED
IGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLV
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
KVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPD
IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADI
EALCREAAMLAVRESIGKPWDIEVKLRELINYLQSISGTFRAAAVELNSVIKATKERESA
EAGEFSELKNAIGKIISVLSPAKEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYL
KDILGKLKEMIDNIYELENKLNTLKEQVSAEEIDEIIKTTQNIIQRFTTSLDELKNILKD
IESIRLKVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEYGRATSVEKKKEEGK
EVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaattaaaagttgctgaagcatatcaaggagatgtagggaggggtattgca
agaatagacccctacacaatggaagaacttggtttaaaaccaggagatgttattgaaatt
gaaggtccaaaaggaaaagcttatgccatagtttatagaggtttcttagaagatgctgga
aaaggaattataagaattgacggttatttaaggcagaatgctggagtagctattggagat
agagtaaaagttaagagagtagagattaaagaagctaaaaaggttgttttagcaccaact
caaccaattagattcggcccaggatttgaggactttgttaaaaggaagatattgggacaa
gtgttaagtaaaggttcaaaagttactattggagttttaggaactgctttaacatttgtt
gttgttagtacaacaccagctggacctgttagagtaactgacttcacacacgttgagtta
aaagaagagccagtcagtgaaatcaaagaaaccaaagttccagatgttacctatgaagat
attggtggtttaaaagaagaggttaagaaagttagagagatgatagaacttccaatgaga
catccagagttatttgaaaaattaggaattgagccacctaaaggagttttattagttgga
ccaccaggaactggtaagacattattggctaaagcagttgctaacgaagctggagcaaac
ttctatgtaattaacggtccagaaataatgagtaagtatgttggagaaacagaggagaat
ttaagaaagatatttgaagaagctgaagagaatgctccaagtataatattcattgatgaa
attgacgctatagctccaaagagagacgaagctacaggagaagtagagagaagattagtt
gctcagctcttaaccttaatggatggattgaagggaagagggcaagttgtagttattgga
gctactaacagaccaaacgcattagacccagctttaagaagaccaggaagattcgataga
gagattgttattggcgtcccagacagagaaggtagaaaagaaatcttacagatacacaca
agaaacatgccattagccgaagatgttgatttagactacttggcagatgtaacacacgga
tttgttggagctgatttagcagctttatgtaaagaggcagcaatgagagctttaagaaga
gtattgccaagtattgacttagaggcagaagaaattccaaaagaagttttagataactta
aaagtcacaatggatgacttcaaagaggcattgaaagatgttgagccatcagcaatgaga
gaagttttagttgaagttccaaatgttaagtgggaagatattggaggattagaagaggtt
aagcaagaattgagagaagctgttgaatggccattaaaagctaaagaagtatttgagaag
ataggtgtaagaccaccaaaaggagtgttgttatttggaccaccaggaactggtaagaca
ttattagctaaagctgtagctaacgaaagtggagcaaacttcataagcgttaaagggcca
gaaatcttcagcaagtgggttggggaatcagagaaggcaataagagagatattcagaaag
gcaagacagtcagcaccatgtataatattcttcgatgaaatcgatgctatagcaccaaaa
agaggtagagacttgagctcagcagttactgataaagttgtaaatcagctattaactgaa
ttggatggaatggaagagccaaaggatgttgttgttattgcagcaacaaacagaccagat
atcattgacccagctttattgagaccgggaagattagatagagtcatattagttccagtt
ccagatgaaaaggcaagattggatatattcaagatacacacaagaagtatgaacttagct
gaagatgttaatttagaagaattagctaagaagactgaaggatatacaggagctgacatt
gaggcattgtgtagagaggcagcaatgttggcagttagagagagtataggaaaaccatgg
gatattgaagtaaaacttagagagttaattaactacttgcagagcatttcaggaacattc
agagctgctgcagtagagttaaacagcgttattaaagctacaaaagagagagaatctgct
gaagcaggagagtttagtgagttaaagaatgctattggaaagataattagcgttttatct
ccagctaaggagaaaattgaagcagtagagaaagaaatcgacaaattccttgaagttata
aacaaagaggaattaaaaccatcagagaaagatgaagcacagaagttggcaaaatactta
aaggatatattaggcaagttaaaagaaatgatagacaacatctacgaattagagaacaag
ttaaataccttaaaagaacaagtttcagctgaagagattgatgagataattaaaacaaca
caaaacattatccaaagattcacaacatcattggatgaactcaagaatatattgaaggac
attgaaagtataagattgaaagtttcaacaaaagatgttaagattaagaaagaacacttc
atgaaagcccttgagaaaattaaaccatctgtaagtaaggaggatatgagagtctatgag
aaattagctcaagagtatggaagagctacgtcagttgaaaagaaaaaggaagaaggtaaa
gaagtgatttaa
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