KEGG   Methanocaldococcus jannaschii: MJ_1422
Entry
MJ_1422           CDS       T00003                                 
Name
(GenBank) activator 1 (replication factor C), 35 KD subunit
  KO
K04801  replication factor C small subunit
Organism
mja  Methanocaldococcus jannaschii
Pathway
mja03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MJ_1422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mja03032]
    MJ_1422
DNA replication proteins [BR:mja03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MJ_1422
SSDB
Motif
Pfam: Intein_splicing LAGLIDADG_3 Rep_fac_C RCF1-5-like_lid AAA_lid_RFC1 HTH_3 RuvB_N AAA_assoc_2 AAA HTH_19 Rad17 IF2_N LAGLIDADG_WhiA HTH_32
Other DBs
NCBI-ProteinID: AAB99433
UniProt: Q58817
LinkDB
Position
complement(1387626..1393169)
AA seq 1847 aa
MVIIMEKPWVEKYRPKTLDDIVGQDEIVKRLKKYVEKKSMPHLLFSGPPGVGKCLTGDTK
VIVNGEIREIGEVIEEISNGKFGVTLTNNLKVLGIDEDGKIREFDVQYVYKDKTNTLIKI
KTKMGRELKVTTYHPLLINHKNGEIKWEKAENLKVGDKLATPRYILFNESDYNEELAEWL
GYFIGDGHADKESNKITFTNGDEKLRKRFAELTEKLFKDAKIKERIHKDRTPDIYVNSKE
AVEFIDKLGLRGKKADKVRIPKEIMRSDALRAFLRAYFDCDGGIEKHSIVLSTASKEMAE
DLVYALLRFGIIAKLREKVNKNNNKVYYHIVISNSSNLRTFLDNIGFSQERKLKKLLEII
KDENPNLDVITIDKEKIRYIRDRLKVKLTRDIEKDNWSYNKCRKITQELLKEIYYRLEEL
KEIEKALEENILIDWDEVAERRKEIAEKTGIRSDRILEYIRGKRKPSLKNYIKIANTLGK
NIEKIIDAMRIFAKKYSSYAEIGKMLNMWNSSIKIYLESNTQEIEKLEEIRKTELKLVKE
ILNDEKLIDSIGYVLFLASNEIYWDEIVEIEQLNGEFTIYDLHVPRYHNFIGGNLPTILH
NTTAALCLARDLFGENWRDNFLELNASVSKDTPILVKIDGKVKRTTFEELDKIYFETNDE
NEMYKKVDNLEVLTVDENFRVRWRKVSTIIRHKVDKILRIKFEGGYIELTGNHSIMMLDE
NGLVAKKASDIKVGDCFLSFVANIEGEKDRLDLKEFEPKDITSRVKIINDFDIDEDTAWM
LGLYVAEGAVGFKGKTSGQVIYTLGSHEHDLINKLNDIVDKKGFSKYENFTGSGFDRKRL
SAKQIRILNTQLARFVEENFYDGNGRRARNKRIPDIIFELKENLRVEFLKGLADGDSSGN
WREVVRISSKSDNLLIDTVWLARISGIESSIFENEARLIWKGGMKWKKSNLLPAEPIIKM
IKKLENKINGNWRYILRHQLYEGKKRVSKDKIKQILEMVNVEKLSDKEKEVYDLLKKLSK
TELYALVVKEIEIIDYNDFVYDVSVPNNEMFFAGNVPILLHNSDERGIDVIRTKVKDFAR
TKPIGDVPFKIIFLDESDALTADAQNALRRTMEKYSDVCRFILSCLTGDAKITLPDEREI
KIEDFIKMFEERKLKHVLNRNGEDLVLAGVKFNSKIVNHKVYRLVLESGREIEATGDHKF
LTRDGWKEVYELKEDDEVLVYPALEGVGFEVDERRIIGLNEFYEFLTNYEIKLGYKPLGK
AKSYKELITRDKEKILSRVLELSDKYSKSEIRRKIEEEFGIKISLTTIKNLINGKIDGFA
LKYVRKIKELGWDEITYDDEKAGIFARLLGFIIGDGHLSKSKEGRILITATINELEGIKK
DLEKLGIKASNIIEKDIEHKLDGREIKGKTSFIYINNKAFYLLLNFWGVEIGNKTINGYN
IPKWIKYGNKFVKREFLRGLFGADGTKPYIKKYNINGIKLGIRVENISKDKTLEFFEEVK
KMLEEFEVESYIKVSKIDNKNLTELIVKANNKNYLKYLSRISYAYEKDNFARLVGEYLRI
KEAYKDIILKEIAENALKEADGEKSLRELARKYNVPVDFIINQLKGKDIGLPRNFMTFEE
FLKEKVVDGKYVSERIIKKECIGYRDVYDITCHKDPSFIANGFVSHNCNYPSKIIPPIQS
RCAVFRFSPLKKEDIAKKLKEIAEKEGLNLTESGLEAIIYVSEGDMRKAINVLQTAAALS
DVIDDEIVYKVSSRARPEEVKKMMELALDGKFMEARDLLYKLMVEWGMSGEDILNQMFRE
INSLDIDERKKVELADAIGETDFRIVEGANERIQLSALLAKMALMGR
NT seq 5544 nt   +upstreamnt  +downstreamnt
ttggtgataataatggaaaaaccatgggtagagaagtatagaccaaaaacattggatgat
attgttggacaggatgaaatagtaaagagattaaagaaatatgtcgaaaaaaagagcatg
ccgcatttattatttagcggacctccaggagttggaaagtgcttaacaggagatacaaaa
gttattgtaaatggagagattagagaaattggagaagttattgaagagataagcaatgga
aaatttggagtaactttaaccaacaacttaaaagttttaggaattgatgaagatggaaaa
attagagagtttgatgtgcagtatgtctataaggataaaaccaacacgttgataaaaata
aaaaccaaaatgggtagggagctaaaagtaacaacttaccatccacttttaataaaccac
aaaaatggagaaataaaatgggagaaagcagagaatttaaaggttggagataaattagca
acaccaagatacattttatttaatgaaagtgattataatgaggaattagcagaatggctt
gggtatttcataggagatgggcatgcagacaaagaatcaaataaaataaccttcacaaac
ggtgatgaaaaacttagaaagaggtttgcagaacttactgaaaagttgtttaaggatgca
aaaataaaagagagaatacacaaagacagaacaccagatatttatgttaattcaaaagaa
gctgttgaatttattgacaagcttggtttaagaggaaagaaagcagataaagttagaatt
ccaaaagaaataatgagaagtgatgcattaagggcatttttaagagcatactttgattgt
gatggtggtattgaaaaacactcaatagttttatcaactgcaagtaaagaaatggcagag
gatttagtttatgccttattaaggtttggaataattgcaaaattgagggaaaaagtaaat
aaaaacaataacaaagtatattaccatattgttatctcaaactcttcaaacttaaggaca
ttcttggacaacattggatttagtcaagaaagaaaacttaaaaagctcttagaaatcata
aaagatgaaaatccaaacttagatgttataactatcgacaaagagaaaataagatacata
agagatagattaaaggttaaattaacaagagacattgaaaaagataattggagttacaac
aagtgcagaaaaatcactcaagaacttttaaaagaaatatactacagattagaagagtta
aaagaaattgaaaaagcattagaagaaaatatattaatcgattgggatgaagttgcagaa
agaagaaaagaaattgcagaaaaaactggaataagaagtgataggattttagaatatata
agaggtaaaagaaaaccaagtttaaagaactatataaaaattgccaatacccttggtaaa
aatattgaaaaaatcattgatgcaatgagaatctttgctaaaaagtattcaagctatgca
gagattggaaaaatgctcaatatgtggaattcaagtataaaaatttacttagagagcaat
acccaagaaattgaaaaacttgaagaaattagaaaaactgaacttaaacttgtaaaagag
attcttaacgatgaaaaattgatagatagcattggctatgtattattcttagcatctaac
gaaatttattgggacgaaattgttgaaattgagcaattaaatggtgaattcacaatctat
gacttacacgttccaagataccacaactttattggtgggaatttaccaactatactgcac
aatacaaccgccgctttatgtttagcaagagatttatttggagaaaactggagagataac
tttttagagttaaatgcctctgtttcaaaagatacaccaatattggttaaaatagatgga
aaggtaaagagaacaacctttgaagaacttgataagatatactttgaaactaacgatgaa
aatgagatgtataagaaagttgataacttagaggttttaactgtagatgaaaactttaga
gttagatggagaaaggtttctacaataattaggcataaagttgataagattttgagaatt
aagtttgaaggaggatatatagagctaactggaaaccactcaattatgatgcttgatgaa
aatggtttagtggcaaagaaagcaagtgatataaaggttggggattgtttcttaagcttt
gtagccaatattgaaggtgaaaaagataggttggatttaaaagagtttgaaccaaaggat
attacttcaagggttaagataattaatgactttgacattgatgaagacactgcatggatg
cttggattgtatgttgctgaaggagctgtaggctttaaggggaaaacatctggacaagtt
atttatacattaggtagccatgagcatgatttaattaataaattaaatgatattgttgat
aaaaaaggatttagcaaatatgaaaacttcactggctctggatttgatagaaaaaggtta
tctgcaaagcagattagaatattaaatacccaacttgcgagatttgttgaggaaaacttc
tatgatggtaatggaagaagagcaagaaataaaagaattccagatattatatttgaatta
aaagaaaatctaagagttgaattcttaaaaggattggctgatggagatagtagtggaaat
tggagagaagttgttagaatatcatccaaatcagataatttattaatcgatacggtatgg
cttgcaagaatatctggcattgaaagttcaatatttgaaaatgaagcaagattgatttgg
aaaggaggaatgaagtggaagaaaagcaacttactaccggctgagccaataatcaaaatg
attaaaaagttagagaataagataaatggaaactggagatatatattaagacatcaactc
tatgaaggtaaaaagagagtttcaaaagataaaattaagcaaattttagaaatggtcaat
gttgagaaattatcagataaagaaaaagaagtttatgatttattgaaaaagttatctaaa
acagagttatatgcgttggttgttaaagagattgaaattattgactacaacgactttgtt
tatgatgtatcagttccaaacaatgagatgttctttgctggaaatgtgccaatattattg
cataattctgatgaaagagggatagatgtaattagaacaaaagtaaaagattttgcaaga
acaaagccaattggggatgttccatttaagattatattcttagatgagagcgatgcatta
actgcagatgcacagaacgctttaagaagaacaatggagaaatattcagatgtttgtaga
tttatcttgagctgtctaactggagatgcaaaaataactcttccagatgagagagagata
aagatagaggactttataaaaatgtttgaagaaagaaagcttaaacatgttttaaataga
aatggagaggatttagttttagcaggggttaaatttaactcaaagatagttaatcataag
gtttatagattagttttagaaagtggtagggagatagaggcaacaggagaccacaagttt
ttaacaagagatggatggaaggaagtttatgagctaaaagaggatgatgaagtattggtt
tatccagcattggaaggagttgggtttgaagttgatgaaagaaggataattggcttaaat
gagttctacgaatttttaacaaactatgagattaaacttggatataaaccattaggtaaa
gcaaaaagctataaggaattaataacaagagataaggagaaaatattaagtagagttttg
gagctctcagataaatacagtaaatcagagattagaagaaagattgaggaagaatttgga
ataaaaatatcactaacaactataaaaaatcttataaatggaaaaattgatggatttgct
ttaaaatacgttaggaaaattaaggaacttggatgggatgagataacttatgatgatgaa
aaagcaggaatctttgcaaggttgctgggctttataattggagacgggcatttatcaaaa
tcaaaagaaggaagaatattgataactgctacaataaatgaacttgaaggaattaagaaa
gatttagaaaaattaggcataaaagcatcaaacataattgaaaaagatattgaacataaa
ttggatggtagagaaattaaaggcaaaacatcatttatatatataaataacaaggcattt
tatttattgctaaacttctggggagttgaaattggaaataaaaccataaacggatataac
attccaaaatggataaaatacggaaataaatttgtcaagagagagtttttgagaggttta
tttggagctgatggaactaaaccgtatatcaaaaaatacaacataaatggaattaaatta
gggataagagtcgaaaacataagtaaagataagacattagagttctttgaggaagttaaa
aagatgttagaagagtttgaagttgaatcatatattaaagtcagtaaaattgataacaaa
aacttaactgagttgatagtgaaagcaaataataaaaactatctaaaatatctatcaaga
atatcctatgcctatgaaaaagacaactttgcaaggttagttggagagtatctaagaatc
aaggaggcatataaggatataatcctaaaagagattgctgaaaatgcattgaaagaagca
gatggtgaaaaatctctaagagaattggcaaggaaatataatgttccagttgattttata
ataaatcaacttaaaggaaaagacattggattaccaagaaactttatgacctttgaagag
ttcttaaaagaaaaggttgttgatggaaagtatgtttcagaaagaatcattaagaaagag
tgtattggttatagagatgtctatgatataacctgccataaagacccttcatttatagca
aatggatttgtgtctcataactgcaactatccaagcaagatcattcctccaattcaatca
agatgtgctgtctttaggttttctccattaaagaaagaggatattgccaaaaaattaaaa
gagattgctgagaaagaaggtttgaatttaactgaaagtggtttagaggcaataatttat
gtctctgagggagatatgagaaaggcaataaatgttttacagacagcggcagctttgagt
gatgttatagatgatgagattgtttataaggtctcatcaagagcaagacctgaggaagtt
aagaagatgatggaattggctttagatggaaagttcatggaggcaagagatttattgtat
aagcttatggttgagtggggaatgagtggggaggatatattaaaccagatgtttagagag
ataaacagtttggatattgatgagaggaagaaggttgagttggcagatgctattggtgaa
actgactttagaatagttgagggagctaatgaacgaattcaattgagtgctttattagca
aaaatggcgttaatgggaagataa

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