Methanocaldococcus jannaschii: MJ_1424
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Entry
MJ_1424 CDS
T00003
Name
(GenBank) tRNA intron endonuclease (endA)
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mja
Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mja03016
]
MJ_1424
Enzymes [BR:
mja01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MJ_1424
Transfer RNA biogenesis [BR:
mja03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MJ_1424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AAB99435
UniProt:
Q58819
Structure
PDB
PDBj
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All DBs
Position
1394461..1395000
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AA seq
179 aa
AA seq
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MVRDKMGKKITGLLDGDRVIVFDKNGISKLSARHYGNVEGNFLSLSLVEALYLINLGWLE
VKYKDNKPLSFEELYEYARNVEERLCLKYLVYKDLRTRGYIVKTGLKYGADFRLYERGAN
IDKEHSVYLVKVFPEDSSFLLSELTGFVRVAHSVRKKLLIAIVDADGDIVYYNMTYVKP
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttggtgagagataaaatgggcaaaaaaataactggattgttggatggagatagagttata
gtgtttgacaaaaatgggatatctaagttatcagcaaggcattatggaaatgttgaaggg
aattttttatctctatctttagttgaagccctctatttgataaatttaggatggttggaa
gtgaaatataaagataacaaacctctaagttttgaagaactatatgaatatgcgagaaat
gttgaagaaagactatgtttaaaatatttagtttataaggatttaagaacaagaggttat
atagtaaagactggtttgaagtatggggctgattttaggctttatgagaggggagctaac
atagataaagaacactctgtttatttggttaaggtatttcctgaagatagctcttttcta
ttaagtgagctaactgggtttgttagggttgctcactcagttagaaaaaaattactcata
gcaatcgttgatgcagatggggatattgtctattataacatgacctatgtaaaaccataa
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