Methanocaldococcus jannaschii: MJ_1565
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Entry
MJ_1565 CDS
T00003
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mja
Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mja03400
]
MJ_1565
DNA repair and recombination proteins [BR:
mja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MJ_1565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
AAA_10
CbiA
Motif
Other DBs
NCBI-ProteinID:
AAB99585
UniProt:
Q58960
LinkDB
All DBs
Position
1540693..1542234
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AA seq
513 aa
AA seq
DB search
MDNNEIIGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDIL
NIEHLEKIREFEDNSSYYILGKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLK
KVFGNGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTGMGKSNTVAVLLRELNKLKAT
VLVFDMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAI
KEIKEERKEHDFSTVDDYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRKNII
TLHYNPINDIREHYINIIPMEELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAKPIFM
IFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQRPKTLDAETLSQCSNLIISK
LIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYGGEDL
NLVELWEKDFINTERLKTDDIEENAFGDDDLFS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggacaataatgagattattggctacacaataggagaaacaaggattgatgaattaaca
tttttggctaaagaagccccaaaagttggggattatgttaaaataaattatgacgactct
gaattattgggaatggttgaaagcacaatccaaggaaacatggctttagaggatatttta
aacattgagcatttagagaaaattagggagtttgaagataactcatcctactacatttta
ggaaagataaaggtattaggagatattagagatttaaataaagatggagctttaaagttg
ccgagagttccaccaaagccaggaataccaatttacagagcagatgatgagttattaaaa
aaagtttttggtaatgggcatttaaaaatagggcatttagttacaagggaagatgtggag
gttaaattagacgcaaataaattatgttcaagacatttggctatattggcaatgactggg
atgggaaagtcaaatactgtagctgttttgttaagagagttgaataagcttaaagcaacc
gttttagtttttgatatgcatggagaatataaagatatttactgcgaaagtgaaaagcta
agagttcatataattgagccgaaaataaatatctataggataaatgatgatgatttgtgt
gatttggctggcgtagatgcccaagcaacaaagcaaagaccatatataagaaaggcgata
aaagaaattaaagaagaacgtaaagaacatgatttcagcacagttgatgattatataaat
gcaataattgggaaattggaagaatacaaatcaaatgataattataaaaaagatgaaagt
agtattcaaacagccatatttagattggaagatatgttgcagtttagaaagaatattata
actcttcactataatccaataaatgatattagggaacattatatcaacataattccaatg
gaagaattggatgagaatgctgtggatattgttgtttcttatatagctaaagcagttttg
gatgataggaagaggattattattgataagggaagagactttgcaaaaccaatatttatg
atttttgaagaggcacatttaatagctccacaacatagaaaaacaagggctaagcattat
ctaagcaggatagcaagagagggaagaaagtttggtgttggtttatgcttagtttcacag
agacctaaaacattagatgctgaaactttatctcaatgctctaatctaataatatctaag
cttattgaaccaacagaccaaaaacatgtccaaatggcttctgaaaatttgagtgaagat
ttagttaaacaattaacaagcttaaacattggtgaggcgataattttaggaccgtgtata
aaagtgccagcaattgttaaggtagataaatttgacggaagatatggaggagaggattta
aatcttgttgaattatgggaaaaggactttataaatactgaacgtttaaaaacagatgat
attgaagaaaatgcctttggagatgatgatttattctcctaa
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