Mycolicibacter sinensis: JDM601_0006
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Entry
JDM601_0006 CDS
T01512
Symbol
gyrA
Name
(GenBank) DNA gyrase (subunit A) GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mjd
Mycolicibacter sinensis
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjd03032
]
JDM601_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_0006 (gyrA)
Enzymes [BR:
mjd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JDM601_0006 (gyrA)
DNA replication proteins [BR:
mjd03032
]
Prokaryotic type
DNA Topoisomerases
JDM601_0006 (gyrA)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JDM601_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
AEF34006
UniProt:
F5YWA5
LinkDB
All DBs
Position
7308..11063
Genome browser
AA seq
1251 aa
AA seq
DB search
MTDTTLPPGDDSVERIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
FDSGFRPDRGHAKSARSVAETMGNYHPHGDSSIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYCLSSEALVRLPFGQSVRIGDVVGGAQPNSDNTVELKVLGRHGNPVVADRL
FHSGEHQTYTVRTAEGYEVTGTANHPLLCLVDVAGVPTLLWKLVEEIRPGDRVVLQRTPP
TEIGPAEWEPTLEALLAGAFISEGFVSETRAGFSNIDASYFGMVVAAYDAVIGGARYVSQ
RTIKSGSLLYELDVHNLAELRRSRLAELTGQRSAQKSVPEWVWQAPTAIKRVFLQALFEG
DGSCSALPRNTIQVSYSTRSEQLGKDVQQLLLEFGVVSKRYQHATGEHKVVITNRGQAEL
FASQIGFGGAKQEKLVGILASLPPCAGMDDDHVPGLATFIRRHCGSRWVDKDWLNRHNID
RLSRWRRDGAEILSRIADPDVRAIATELTDGRFYYAEVASVTEAGTQAVYSLRVDTDDHA
FITNGFVSHNTEARLTPLAMEMLREIDEETVDFVPNYDGRVQEPTVLPSRFPNLLANGSG
GIAVGMATNIPPHNLRELAEAVFWCLDNHDADEETTLDAVMERVKGPDFPTSGLIVGSQG
IGDAYRTGRGSIRMRGVVEIEEDARGRALLVITELPYQVNHDNFITSIADQVRDGKLVGI
ANIEDQSSDRVGLRIVVEVKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLRLD
QMIRHYVAHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASQTVDVARQ
GLISLLDIDEIQAQAILDMQLRRLAALERQKIIDDLAKIEAEIADLEDILAKPERQRGIV
QQELAEIVEKYGDDRRTRIIAADGDVADEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVQGAGLKQDDIVAHFFVCSTHDWILFFTTQGRVYRAKAYDLPEALRTARGQHVANL
LAFQPEERIAQVIQIKGYEDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAINLREGDEL
VGAMLCSAEDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNADDYLLSLNVVRE
DTYLLVATAGGYAKRTAIEEYTAQGRGGKGILTIQYDPKRGRLVGALIVDDDSELYAITS
GGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLIAIARNADEEAADDDSDS
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccacgctgccacccggagacgactcggtagagcggatcgaaccggtcgac
atccagcaggagatgcagcgcagctacatcgactacgcgatgagcgtgatcgtgggccgt
gcgctgcccgaggtccgcgacggcctcaagccggtgcaccgccgggtgctctacgcaatg
ttcgactccgggttccggccggatcgcggccacgccaaatcggcgcgctcggtcgccgag
acgatgggtaactaccacccgcacggcgactcgtcgatctacgacaccctggttcggatg
gcccaaccgtggtcgttgcgctacccgctggtcgacggccagggcaacttcggttcgccg
ggcaacgacccgccagccgcgatgaggtattgtctctcttcagaggcattggtgcggttg
ccgtttgggcagtcggtgcggatcggtgatgtcgtggggggagcacagcctaactctgac
aacacggtggaattgaaggttctcggccggcacggcaaccccgttgtggccgaccggctg
ttccattcgggcgagcaccagacctacacggtccgcacggccgaaggctacgaagtcacc
ggaaccgcgaaccatccattgctgtgcctggtggatgtcgctggtgtgcccacgctgctg
tggaagttggtcgaggagatccgtcccggcgaccgggtcgtgctgcaacggactccgccg
accgagatcggaccggccgagtgggaaccgacgctggaggcattgttggcgggcgccttc
atcagcgaaggcttcgtctccgagacccgcgccggcttcagcaacatcgacgccagctac
ttcggcatggtcgtcgccgcctacgacgctgttatcggcggcgcccggtacgtttcgcaa
cgcaccatcaagtcgggttcgctgctctacgagctcgacgtccacaacctggccgagttg
agacggtcacggctggcggaactcaccggccagcggtccgcgcagaaatccgttccagaa
tgggtctggcaagccccgacggccatcaagcgggtattcctgcaggcactgttcgaaggc
gatggatcgtgttctgccttgccacgcaacacgattcaagtgtcctactcgacacgaagc
gaacagttgggcaaggacgtccagcagctgttgctggaattcggggtggtgtccaagcgg
taccagcacgcgacgggcgaacataaggtcgtcatcaccaaccgcggtcaagcggagctt
ttcgcaagccagatcggcttcggcggagccaagcaggagaagctcgtcggcatcttggct
tcgctgcccccttgcgccggcatggacgatgaccacgttcccggactagcgacgttcatt
cgccggcattgcggtagccgctgggtcgacaaggactggctgaaccggcacaacatcgat
cggctgtctcggtggcggcgcgatggggccgagatcctctcccgtatcgccgacccggac
gtgcgggcaattgccaccgagctcaccgacgggcgtttctactatgcggaagtcgcctcg
gtcaccgaggccggcacgcaggcggtgtacagcctgcgggtggacaccgacgaccacgcc
ttcatcaccaacgggttcgtcagccacaacaccgaagcgcggctgactccgctggccatg
gagatgctgcgtgaaatcgacgaggagacagtcgatttcgtcccgaactatgacggccgg
gtgcaggagccgacggtgctgcccagccggttcccgaacctgctggccaacggctccggc
ggtatcgcggtcggtatggcgaccaacatcccgccgcacaatctgcgcgaactcgccgaa
gcggtgttctggtgcctggacaaccacgacgccgacgaagagaccaccctggacgcggtg
atggagcgggtcaagggcccggacttccccacctcggggctgatcgtcggatcgcagggc
atcggcgacgcctaccggaccgggcgcgggtccatccggatgcgcggggtggtcgagatc
gaggaggatgcccgcgggcgggccctgctggtcatcaccgagctgccctaccaggtgaac
cacgacaacttcatcacgtcgatcgccgaccaggtgcgcgacgggaagctggtcggtatc
gctaacatcgaggaccagagcagcgaccgggtggggctgcgcatcgttgtcgaggtcaag
cgcgacgccgtggccaaggtggtgctgaacaacctttacaagcacacccagctgcagacg
agcttcggtgccaacatgctttcgatcgtcgacggggtgccgcgcaccctgcggctggat
cagatgatccgccactacgtcgcgcaccaactcgacgtgatcgtgcgacgcaccacctac
cggctgcgcaaggccaacgaacgcgcgcacatcctgcgcggcctggtcaaggcgctcgac
gccctcgatgaggtcatcgcactgatccgggcgtcgcagaccgtcgatgtggcacgccag
ggcctgatcagcctcctcgatatcgatgagatccaggcgcaagcgatcctggacatgcag
ctgcggcggctggccgcgctggagcgccagaagatcatcgacgacctggccaagatcgag
gccgagatcgccgatctggaagacatcctcgccaaaccggaacggcagcgcgggatcgtg
cagcaggaactcgccgagatcgtcgagaagtacggcgacgaccgtcgtacccggatcatc
gccgccgacggcgacgtcgccgatgaggatctgatcgcccgcgaggacgtcgtcgtcacg
atcaccgagaccggttacgccaaacgcaccaagaccgatctgtaccgcagccagaagcgc
ggcggcaagggcgtgcagggcgccgggctcaagcaggacgacatcgtggcgcacttcttc
gtctgctcgacccacgactggatcctgttcttcaccacccaagggcgggtgtaccgggcc
aaggcctacgacctgccggaggcgctgcgcaccgctcgcggtcagcacgtcgccaacctg
ttggccttccagcccgaggagcgcatcgcccaggtcatccagatcaagggctacgaggac
gcgccgtatctggtgctggccacccgcaacggcctggtcaagaagtccaagctgaccgac
ttcgactcgaaccgctccggcggcatcgtcgcgatcaacctgcgcgagggcgacgaactc
gtcggtgcgatgttgtgctccgccgaggatgatctgctgttggtctcggccaacggccag
tccatccggttctcggcgaccgacgaagcgctgcgcccgatgggccgcgcgacgtcgggt
gtgcagggcatgcggttcaacgccgacgactacctgctgtcgctgaacgtggtccgcgag
gacacctacctgttggtggccaccgccggcggctatgccaagcgaaccgcgatcgaggag
tacaccgcccagggtcgcggcggcaagggcatcctgaccattcagtacgatcccaagcgg
ggccggctggtcggggcgttgatcgtcgacgatgacagtgagctctacgcgatcacctcc
gggggcggggtgatccgtaccgcggcgcggcaggttcgcaaggcagggcgccagaccaag
ggcgttcggttgatgaacctgggtgagggcgacacactgatagcgatcgcacgaaacgcc
gacgaagaagcggccgacgacgactcggatagctga
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