Mycolicibacter sinensis: JDM601_0401
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Entry
JDM601_0401 CDS
T01512
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III protein XthA
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JDM601_0401 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_0401 (xthA)
Enzymes [BR:
mjd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JDM601_0401 (xthA)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JDM601_0401 (xthA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEF34401
UniProt:
F5Z0L2
LinkDB
All DBs
Position
complement(422525..423355)
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AA seq
276 aa
AA seq
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MTALRLATWNVNSIRTRVGRVTDWLARADVDVLTMQETKCTDVQFPTLPFHELGYEVAHV
GHNQWNGVAIASRVGLDAVEIGFDGQPTWAKADADPTVEARALGASCGGVRVWSLYVPNG
RALNDPHYTYKLEWLAALRDTAEGWLRDDPSAPIALTGDWNIAPQDDDVWSMEFFDGATH
VSEPERRAFHALTEAQYLDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAT
RVAHAEIVREERKGKSPSDHAPVLVDIQPAPKPRVI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcgctgcgactggccacctggaacgtcaactccatccgcactcgcgtgggccgg
gttaccgactggctggcccgcgccgacgtcgacgtgctgacgatgcaggagaccaagtgc
accgacgtgcagttccccacgttgccgtttcacgaactcggctacgaggtggcacatgtc
ggccacaaccagtggaacggggtggcgatcgcctcccgggtcggtctggacgccgtcgag
atcgggtttgacgggcaacccacctgggccaaggcggacgccgacccgacggtcgaggct
cgcgcgctgggcgccagctgcggcggagtccgggtgtggagtctgtatgtgcccaatggc
cgcgccctgaacgacccgcactacacctacaagctggaatggcttgccgcgttgcgcgat
accgccgaaggctggctgcgtgacgatccctcggcgccgatcgcgttgacgggcgactgg
aatatcgccccgcaggacgacgacgtgtggagcatggagttcttcgacggcgcgacccac
gtctcggagcccgagcgccgggcgtttcacgcgctgaccgaggcgcagtacctcgacgtg
gtgcgaccgttcacgccgggccccggtgtctacacctattgggactacacccaactacgg
ttccccaagaagcagggcatgcgaatcgacttcatcctgggctcgcccgcgctggccacc
cgcgtcgcgcacgccgagatcgtccgggaggaacgcaagggcaagtcgcccagcgatcac
gcgccggtgctggtggatatccagccggctccgaaacctcgggttatatga
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