Mycolicibacter sinensis: JDM601_0506
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Entry
JDM601_0506 CDS
T01512
Symbol
hemD
Name
(GenBank) uroporphyrin-III C-methyltransferase HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd00860
Porphyrin metabolism
mjd01100
Metabolic pathways
mjd01110
Biosynthesis of secondary metabolites
mjd01120
Microbial metabolism in diverse environments
mjd01240
Biosynthesis of cofactors
Module
mjd_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
mjd_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JDM601_0506 (hemD)
Enzymes [BR:
mjd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
JDM601_0506 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
JDM601_0506 (hemD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
AEF34506
UniProt:
F5Z1K5
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All DBs
Position
532433..534082
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AA seq
549 aa
AA seq
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MFVGSGPGDPGLLTARARTALTNAALVFVDPDVPEAVLGLVGTDLPPIAGPVPPDPKADK
TDTAQEGAADAEDAAATVPGGPDIRPALGEPAEVAKILTAEARSGADVVRLVAGDPLSVD
SVITEVNAVARTTVQFEIVPGLPATSAVPTYAGLPLGSSHTVADVRDPHVDWAALAAAPG
PLILQATTSHLPEAARTLIEYGLADATPCVVTTSGTTCAQRSVEASLSALTDPASLASID
PVILPNGQETAAGPLVVTIGKTVNNRAKLNWWESRALYGWTVLVPRTKDQAGEMSEKLVG
HGASPVEVPTIAVEPPRSPAQMERAVKGLVDGRYQWVVFTSTNAVRAVWEKFGEFGLDAR
AFSGVKIACVGEATAERVRAFGISPELVPAGEQSSLGLLDEFPPYDDVFDPVNRVLLPRA
DIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATIREMIKTGGFDAVCFTSSSTVRNLV
GIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARLRAEGALP
PPRKKSRRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtcggttcgggtccgggtgacccgggcctgctgacggcgcgggcgcggacggcg
ctgacgaacgccgcgctggtgttcgtcgaccccgacgtgcccgaggcggtgctggggctg
gtcggcacggacctgcccccgatcgccgggccggtgccgccggaccccaaggcggacaag
accgatacggcccaggaaggcgccgccgacgccgaagacgccgccgcgaccgtcccgggc
gggcccgacatccgtcccgcactgggcgaaccggccgaggtggccaagatcctgaccgcc
gaggcgcgctccggcgccgacgtggtgcgtctggtggccggcgacccgctgtccgtcgac
tccgtcatcaccgaggtcaacgcggtagcccgcaccaccgtgcagttcgagatcgtgccg
ggactgcccgccaccagcgcggtgcccacctacgccggcctgccgctcggctcgtcgcac
accgttgccgacgtccgcgacccgcacgtcgactgggccgccctggctgcggccccgggc
ccgctgatcctgcaggccaccacctcgcacctgcccgaggcggctcgcacgctgatcgaa
tacggcctcgcggacgccaccccgtgcgtggtcaccacctcgggcaccacctgcgcacag
cgctcggtggaggccagcctcagcgcgctgaccgacccggcgtcgctggccagcatcgac
ccggtcatcctgcccaacggtcaggagaccgccgccggtccattggtggtgaccatcggc
aagacggtgaacaaccgggccaagctgaactggtgggagagccgcgcgctgtacggctgg
acggtgctggtgccgcgcaccaaggatcaggccggcgagatgagcgagaagctggtcggg
cacggcgcctcgcctgtcgaggtgcccaccatcgccgtggaaccgccgcgcagccccgcc
cagatggaaagggccgtcaagggtttggtcgacggccgctaccagtgggtggtgttcacc
tcgaccaacgcggtacgtgcggtctgggagaagttcggtgaattcgggctggacgcccgc
gcattctccggggtgaagatcgcctgtgtcggcgaagcgaccgccgagcgggtccgggcg
ttcgggatcagccccgagctggtgcccgccggggagcagtcctcgctgggcctgctcgac
gaattcccgccctacgacgacgttttcgatccggtgaaccgggtgctgctgccgcgcgcc
gacatcgctaccgagacgctggccgaggggctgcgtgagcggggttgggagatcgaggac
gtcaccgcctaccgcacggtgcgggccgccccgccgccggcgaccatccgggagatgatc
aagaccggcggattcgacgcggtgtgcttcacgtcgagttccacggtgcgcaacctggtc
ggcatcgccggcaagccgcacgcccgcacgatcgtggcctgcatcggccccaagaccgcc
gagacggcagcggaattcgggttgcgggtcgacgtgcagcccgagacggccgcggtcggt
ccgctggtcgacgcgctggccgagcacgccgcccggttgcgtgccgagggcgccctgccg
ccgccgcgcaagaagagccgccggcgctga
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