Mycolicibacter sinensis: JDM601_0789
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Entry
JDM601_0789 CDS
T01512
Symbol
ercc3
Name
(GenBank) DNA helicase Ercc3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JDM601_0789 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
JDM601_0789 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjd03021
]
JDM601_0789 (ercc3)
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_0789 (ercc3)
Enzymes [BR:
mjd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JDM601_0789 (ercc3)
Transcription machinery [BR:
mjd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JDM601_0789 (ercc3)
DNA repair and recombination proteins [BR:
mjd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JDM601_0789 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AEF34789
UniProt:
F5YSF3
LinkDB
All DBs
Position
complement(851716..853368)
Genome browser
AA seq
550 aa
AA seq
DB search
MSTDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAA
GHDAEQVVDALVSHSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLEEV
LRNKKIAPMLGARIDDDTVVVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIALCQDG
WQLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKR
ELIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDE
VHLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIA
PAECIEVRVTMTESERMTYAIAEPEERYKLCSTVHSKIAVVRSILKQHPGEQTLVIGAYL
DQLEELGEQLDAPVIQGSTRTAEREKLFDAFRKGEVSTLVVSKVANFSIDLPEASVAVQV
SGTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIR
DADDLLGPAI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacgggccgttgatcgtgcaatccgacaagaccgtgctgctcgaggtcgat
catgagcaggccggcgcggcccgcgccgcgatcgcgccgttcgccgagttggagcgagcc
cccgagcacgtgcacacctaccggatcaccccgctggcgttgtggaacgcccgcgccgcc
gggcacgacgccgagcaggtggtcgacgcgctggtctcccactcccgctacgcggtgccg
cagccgctgctggtcgacatcgtcgacaccatggcccgctacgggcggctgcagctggtg
aagagtccggtgcacggcctgaccctggtgagcctggaccgcgcggtgctcgaggaggtg
ctgcgcaacaagaagatcgccccgatgctcggcgcccgcatcgatgacgacaccgtggtg
gtgcatcccagcgaacgcggccgggtcaagcagatgctgctcaaaatcggctggcccgca
gaggatctggccggctatgtcgacggcgaggcgcatccgatcgcgctgtgtcaggacggc
tggcagctgcgcgactatcaggagatggcggccgactcgttctggtcgggtggttcgggg
gtggtggtgctgccgtgcggcgccggcaagacgctggtcggcgccgccgccatggccaaa
gcgggtgcgaccaccctgatcctggtcaccaacaccgtcgccggccggcagtggaagcgc
gagctgatcgcgcggacctcgctgaccgaagaggagatcggcgagtactccggagagcgc
aaggagatccggccggtcaccatcgccacctaccaggtgatcacccggcgcaccaagggt
gaataccggcatctggagctgttcgacagccgcgactggggactgatcatctacgacgag
gtgcatctgctgccggcgccggtgttccggatgaccgccgacctgcagtcgcggcggcgg
ctggggctgaccgccacactgatccgcgaggacggccgcgaaggtgacgtgttcagcctg
atcgggcccaagcgctacgacgcaccctggaaggacatcgaggcccagggctggatcgcg
ccggccgaatgcatcgaggtgcgggtcaccatgaccgagagcgagcggatgacctacgcg
atcgccgagccggaggaacgctacaagctgtgctcgacggtgcactccaagatcgcggtg
gtgcgctcgatcctcaaacagcatcccggcgagcagaccctggtgatcggcgcctacctc
gatcagctcgaagaactgggcgagcagctcgacgccccggtgatccagggctcgacgcgc
accgccgagcgcgagaagctgttcgacgcgttccgcaagggcgaggtctccaccctggtg
gtgtccaaagtcgccaatttctccatcgacctgcccgaggcctcggtggccgtccaggtc
tcgggtaccttcgggtcccgccaggaggaggcccagcggctgggccggctgttgcgcccc
aaggccgacggcggtggcgcggtgttctactcggtggtcgcccgcgacagcctggacgcc
gagtacgccgcgcaccggcagcggttcctggccgagcagggctacggctacatcatccgc
gacgccgacgacctgctgggaccggcaatctag
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