Mycolicibacter sinensis: JDM601_1502
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Entry
JDM601_1502 CDS
T01512
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03030
DNA replication
mjd03430
Mismatch repair
mjd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDM601_1502 (holA)
03430 Mismatch repair
JDM601_1502 (holA)
03440 Homologous recombination
JDM601_1502 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjd03032
]
JDM601_1502 (holA)
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_1502 (holA)
Enzymes [BR:
mjd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JDM601_1502 (holA)
DNA replication proteins [BR:
mjd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JDM601_1502 (holA)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JDM601_1502 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
YjeF_N
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AEF35502
UniProt:
F5YZ10
LinkDB
All DBs
Position
1623790..1624752
Genome browser
AA seq
320 aa
AA seq
DB search
MSQPVSPLHLILGDEELLVERAVAQVLAAVRAQAGSADIPVDRLRAGEVEAGELAELLSP
SLFADERVVVLEAAGEAGKDAVTLIGATAADVPPGTVLVVAHSGGGRAKALAGQLRQLGA
EVHPCARITKATERADFVRAEFRRLKVRVDDACVTALLDAVGSDIRELAAACSQLVADTG
GHVDAVAVRRYHSGKAEVKGFDVADRAVVGDVEGATEALRWAMIRGEPHVVLADALAEAI
HTIARVRPRSGDPYRLAGELGMPPWRVQRAQKQARHWSQESVAAAVRLVAGLNADVKGAA
ADADYALEAAVRKVAELAAS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaaccggtttcgccgctacacctgatcctcggtgacgaggaactgctggtcgaa
cgggccgtcgcgcaggtgctggcggcggtgcgggcccaggccggcagtgccgacatcccg
gttgaccggttgcgggccggcgaggtcgaggccggcgaactggccgaactgctcagcccg
tcgctgttcgccgatgaacgtgtggtggtgctggaagccgccggcgaggccggcaaggat
gcggtgaccctcatcggcgcgacggccgccgacgtcccgccgggcaccgtgctggtcgtg
gcgcattccggcgggggacgggccaaggcgctggccgggcagctgcggcagctcggcgcc
gaggtgcatccgtgcgcgcgtatcaccaaggccaccgaacgcgccgacttcgtccgcgcc
gagttccgccggctcaaggtccgggttgacgacgcctgcgtcacggcgctgctcgacgcg
gtcggctccgacatccgcgagctcgccgcggcctgctcacagctggttgccgacaccggc
gggcatgtcgacgccgtcgcggtgcgccgttaccacagcggcaaagccgaagtgaagggc
ttcgacgtcgccgatcgggcggtcgtcggggatgtcgaaggcgccaccgaggcgttgcga
tgggcgatgatccggggcgagccgcacgtggtgctggccgacgcgctggccgaggctatc
cacaccatcgcccgggtgcggcccagatccggagacccctaccggctggccggcgagttg
ggcatgccgccctggcgggtgcagcgggcacagaaacaggcccggcattggtcgcaggaa
tcggtcgccgccgcggtgcggctggtggcgggcctcaacgccgacgtcaagggcgccgca
gccgacgccgactacgcgctggaggcggcggtgcgcaaggtcgccgaactggccgccagc
tga
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