Mycolicibacter sinensis: JDM601_1881
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Entry
JDM601_1881 CDS
T01512
Name
(GenBank) conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mjd
Mycolicibacter sinensis
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjd03032
]
JDM601_1881
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_1881
Enzymes [BR:
mjd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JDM601_1881
DNA replication proteins [BR:
mjd03032
]
Prokaryotic type
DNA Topoisomerases
JDM601_1881
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JDM601_1881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEF35881
UniProt:
F5Z2U4
LinkDB
All DBs
Position
complement(2047275..2048423)
Genome browser
AA seq
382 aa
AA seq
DB search
MRLRRSQVGATGFRRVGRGRGFSYTDGNEPVDDPAVLARIKELAIPPAWRNVWICPYPNG
HIQAVGTDAAGRRQYLYHQQWQAERAEEKYDRVLNLARMLPQWRADLLADLGGRGLNRGR
VLALAQQLIDRGYFRAGGEEYTQENGSFGLATLLRDHVRIRSDCVDFDYPAKSGVRRTVS
VDDPLVVRAVRALLRAPTDIPRLLVYRTPEGWCEVRADDLNERFRELTDVQFSVKDLRTW
HGTVLAAENFAAAREPTSKTVRRREIAAVMRCVSEELGNTPAVARGSYVDPRVVDAYEQG
MAIRAALNRVPPPPPREGVRPPGRRGERDRPIDPAYRPGTALNCTAGCGLRRLGSIDASR
DPRAPVRHAGRPARDRRYRLRR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcgcaggagccaggtcggcgccaccggattccgccgggtcggacggggccgc
ggcttttcctacaccgacggcaatgagccggtcgacgacccggcggtactcgctcggatc
aaggaactggccatccccccggcctggcggaacgtgtggatctgcccttaccccaacggc
cacatccaggccgtgggaaccgatgccgccgggcgccggcaatatctgtaccaccagcag
tggcaggcagagcgagccgaagagaagtacgaccgggtgctgaacctggccaggatgctg
ccgcagtggcgcgccgatctgctggccgacctgggcggccgcgggctgaatcgcggccgc
gtgctggccctcgcccagcaactgatcgaccggggttatttccgggccggcggcgaggaa
tacacccaggagaacggcagcttcggactggccacgctgctgcgcgaccacgtccggata
cgcagcgactgcgtggacttcgactacccggccaaaagcggcgtacggcggacggtgtcg
gtcgacgatccgctggtggtgcgggcggtgcgcgcgttgttgcgcgcccccaccgacatt
ccccggttattggtgtaccgcacgcccgagggctggtgcgaggtgcgcgccgacgacctc
aacgagcggttccgggaactcaccgatgtgcagttcagcgtcaaggatcttcggacctgg
catggcaccgtgctggcagccgagaacttcgccgctgcccgcgagccgacatcgaaaacc
gttcgccgaagggagatcgccgcggtaatgcgttgcgtctccgaggagttgggtaacacg
ccggcggtcgcccgtggttcctacgtggatccgcgggtggtggacgcctacgagcagggc
atggccatccgtgcggcgctgaaccgggtgccccccccccccccgcgggaaggagtccgc
ccgccgggtcgccgcggagaacgcgaccgcccgattgatccggcgtatcgaccgggcacg
gcgctgaattgcaccgctggttgcggcctccggcggttaggatcgattgatgcgtcacgc
gatccacgtgcccctgttcggcacgctggccgacccgcgcgcgatcgccgatatcgcctg
cgccgctga
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