Mycolicibacter sinensis: JDM601_2426
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Entry
JDM601_2426 CDS
T01512
Name
(GenBank) conserved hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mjd
Mycolicibacter sinensis
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjd03016
]
JDM601_2426
Enzymes [BR:
mjd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JDM601_2426
Transfer RNA biogenesis [BR:
mjd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JDM601_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEF36426
UniProt:
F5YVK5
LinkDB
All DBs
Position
2624676..2625938
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AA seq
420 aa
AA seq
DB search
MTGQTTEPATEEPEPTPLPHPADGVPEVSVTTRQIGAAAEKLAGGHGPFAVDAERASGFR
YSNRAYLIQIRRAGAGTVLIDPVGAGSDPAALLRPVAEVLDDDEWILHAADQDLACLAEV
GMWPKALYDTELAGRLAGFDRVNLAAMVQRLLGLGLAKGHGAADWSKRPLPAEWLNYAAL
DVEVLIELREAIAEVLSGQGKSDWAAQEFSHLRSTDFITSTRRDRWRRTSGIHKVRDRRG
LAAVRELWTVRDRIAERRDIAPGRILPDAAIIAAAVADPTTVDELLALPVFGGPKQRRSA
ATWLAALAAARDNPEPPDSAEPPSGPPPPSRWSRRKPEAAARLEAARGALGQLSEQVSVP
TENLLSPDLLRRLCWDWSAATPDPAVAIEEFLNTGGARPWQRQLTVPLLAQALGATVAGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacagaccaccgaaccggccactgaagagcccgaaccgacgccgctgccgcat
cccgccgacggcgtaccggaggtgtcagtcaccacccggcagatcggcgccgccgccgag
aagctggccggcggccacggcccgttcgcggtggacgccgaacgggcgtcgggcttccgc
tactccaaccgcgcctacctgatccagatccggcgcgccggtgccggcaccgtgctgatc
gacccggtcggggcgggctcggatccggcggccctgctgcgcccggtcgccgaggtgctc
gacgacgacgagtggattctgcacgccgccgaccaggatctggcctgcctggccgaggtc
ggtatgtggccgaaggcgctctatgacaccgaactggccgggcggctggccggcttcgac
cgggtcaacctggcggcgatggtgcagcggctgttggggctgggcctggccaagggccac
ggcgccgccgactggtcgaagcgtccgctgcccgccgagtggctcaactacgcggcgctg
gacgtcgaggtcctcatcgaactgcgcgaggccatcgccgaggtgctgtccggccagggt
aaaagtgattgggcggcacaggaattcagtcatctgcggagcaccgacttcatcacgtcg
acgcgccgggaccgctggcggcgcacctcgggtatccacaaggtgcgcgaccggcgcggg
ctggccgccgttcgtgaactgtggacggtgcgcgaccggatcgccgagcgccgcgatatc
gcgcccgggcgcatcctgcccgacgcggcgatcatcgccgcagccgtcgccgatcccacc
accgtcgacgagttgctcgccctgccggtattcggcggacccaagcagcgccgcagcgcg
gcgacctggctggccgcgctggctgccgctcgcgacaacccggaaccgccggactccgcc
gaacccccgagcggcccaccgccgccctcgcgctggtcgcggcgcaaacccgaggcggcc
gcgcgactggaagcggcccgcggcgcgctcgggcaactgtccgagcaggtgagcgtgccg
accgagaacctgctctcccccgacctgctgcgccgactgtgctgggactggagtgcggcg
acaccggaccccgcggtcgcgatcgaggagttcctcaacaccggcggcgcccggccctgg
cagcggcagttgacggtgccgctgctcgcccaagccctcggcgctacggtcgccggcggc
tag
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