Mycolicibacter sinensis: JDM601_2468
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Entry
JDM601_2468 CDS
T01512
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd00300
Lysine biosynthesis
mjd00470
D-Amino acid metabolism
mjd01100
Metabolic pathways
mjd01110
Biosynthesis of secondary metabolites
mjd01120
Microbial metabolism in diverse environments
mjd01230
Biosynthesis of amino acids
Module
mjd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JDM601_2468 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JDM601_2468 (dapF)
Enzymes [BR:
mjd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JDM601_2468 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AEF36468
UniProt:
F5YW57
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All DBs
Position
complement(2662309..2663175)
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AA seq
288 aa
AA seq
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MLFAKGHGTQNDFVVLPDLGVELDLTAAAVSALCDRRRGLGADGVLRVTTAGAAVTAGVL
DQLPEGVSAGDWFMDYRNADGSVAEMCGNGVRVFAHYLRAAGLESADEFVVGSLAGPRPI
TVHHADDVRAEVTVDMGKANTLGPGEAVVGGRRFAGLAVDVGNPHLACVDPALSAAELAA
LDVAAPVSFDRGQFPNGVNVEVLTAARDGAVSMRVHERGVGETRSCGTGTVAAAVAALAD
AGASTGTLRVDIPGGQVRVIVTEATSYLRGPSELVARGDIAAGWWSAQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcgccaagggccacggcacccagaacgacttcgtcgtattgccggacctaggg
gtggaactggacctgacggccgccgcggtgagcgcgctgtgtgaccggcgccgcggcctg
ggcgccgacggagtgctgcgcgtcaccacggccggggccgcggtcaccgccggcgtgctc
gaccagctgcccgagggggtgtcggccggcgactggttcatggactaccgcaacgccgac
ggctcggtggccgagatgtgcggcaacggggtccgggtcttcgcccactacctgcgcgcc
gccggcctggaatcggccgatgagttcgtcgtcggctcgctggccgggccgcggccgatc
accgtgcaccacgccgacgacgtgcgggccgaagtcaccgtcgacatgggcaaggccaac
acgctgggtccgggcgaggcggtggtgggcgggcggcgattcgccgggctcgccgtcgac
gtgggcaatccgcatctggcgtgcgtggatccggcactgtcggcggccgagctggccgcg
ctggatgtggccgcaccggtcagtttcgaccgcgggcagttcccgaacggggtgaacgtc
gaagtcctgaccgccgcccgtgacggcgcggtgtcgatgcgggtgcatgagcgcggggtc
ggggagacccggtcatgcgggaccggcacggtggccgccgcggtggccgcactggccgac
gccggcgcgtcgaccggcacactgcgggtcgacatcccgggcgggcaggtccgcgtcatc
gtcaccgaggcgaccagttatctgcgcggcccgtcggagctggtagcccgcggcgacatc
gcggcggggtggtggtcggcgcagtga
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