Mycolicibacter sinensis: JDM601_2549
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Entry
JDM601_2549 CDS
T01512
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mjd
Mycolicibacter sinensis
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjd03016
]
JDM601_2549 (truB)
Enzymes [BR:
mjd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JDM601_2549 (truB)
Transfer RNA biogenesis [BR:
mjd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JDM601_2549 (truB)
Prokaryotic type
JDM601_2549 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
PQQ
Motif
Other DBs
NCBI-ProteinID:
AEF36549
UniProt:
F5YWU4
LinkDB
All DBs
Position
complement(2735921..2736799)
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AA seq
292 aa
AA seq
DB search
MQPGLVVVDKPAGITSHDVVARCRRFFGTRKVGHAGTLDPMATGVLVVGIERATKILGLL
TTSSKSYAATIRLGQTTSTEDAEGEVLQTVSADHLTDSQIAEAIAGLRGDIAQVPSAVSA
IKVSGKRSYQLAREGNAVELPARPVRIERFELLDARRAGDFIDLDVEVDCSAGTYIRALA
RDLGDELGVGGHLTALRRTRAGSFGLDQARTLEELGENPRLSYSLDEACLQTFPRRALSA
DEALDVSHGRPLTPAGIDGVYAAAAPDGRVIALLEDSGKRTKSVVVIRPATL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacccggcctggtggtcgtcgacaagcccgccggaatcaccagccacgacgtggtg
gcccggtgccgcagattcttcggcacccgcaaggtcggccacgccggcaccctggacccg
atggccaccggggtgctggtggtcggcatcgaacgggccaccaagatcctggggctgctc
accacgtcgtcgaagtcgtacgccgccaccatccggttgggtcagaccacctccaccgaa
gacgccgaaggcgaagtgctgcagacggtttcagccgaccacctcaccgattcacagatc
gccgaagcgatcgccggcctgcgcggtgatatcgcgcaggtgccttcggcggtcagcgcc
atcaaggtctccggtaagcggtcctatcagctggcgcgggagggcaacgcggtggagctg
ccggcccggccggtgcgcatcgagcggttcgagttgctggacgccaggcgcgcgggcgac
ttcatagatctggacgtcgaggtggactgttcggcgggcacctacatccgggcgctggcc
cgcgacctcggcgacgaactgggagtgggcgggcacctgacggcgctgcgccgcacccgc
gcgggcagcttcggtctcgatcaggcccgcaccctcgaggaactgggggagaacccgcgg
ctgagctacagcctggatgaggcctgcctgcagacgtttccacgccgcgccctgtccgcc
gacgaggcactcgacgtcagccacggccggccgctgaccccggcgggaatcgatggtgtc
tacgccgcggccgcgcccgacgggcgggtgatcgcgctgctggaagactccggcaagcga
accaagtcggtggtcgtcatccggccggcgacgctatag
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