Mycolicibacter sinensis: JDM601_2656
Help
Entry
JDM601_2656 CDS
T01512
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JDM601_2656 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_2656 (fpg)
Enzymes [BR:
mjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JDM601_2656 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JDM601_2656 (fpg)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JDM601_2656 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEF36656
UniProt:
F5YXL6
LinkDB
All DBs
Position
complement(2840527..2841363)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVEVVRRGLDAHLVGRTIAGVRVHHPRAVRRHDAGPADLTGRLLDARIVGTDRRG
KYLWLLLSTDEALVVHLGMSGQMLLGDLPDTRHLRIAAVLDDGTKVSFVDQRTFGGWQLT
DLVAVDDSVVPLPVAHLARDPLDPRFDAESVVNVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRAGIRGTRMADALSRPRLRALLESARAVMSDALAAGGTSFDSLYVNVNGESGYFS
RSLDAYGREDEPCRRCGTLIRRQKFTNRSSYYCPKCQR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcccgaggtcgaggtggtgcgccgcggcctggacgcccacctggtaggc
cgcaccatcgccggagtccgggtccaccacccgcgtgcggtgcgccggcacgatgccggt
ccggccgacctgacgggccgactgctcgacgcccggatcgtcggcaccgaccggcgcggc
aagtatctgtggctgctattgagcacggatgaggcgctggtggtgcacctggggatgagc
gggcagatgctgctgggagacttgcccgacaccagacacctgcggatcgccgcggtgctc
gacgacggcaccaaggtcagcttcgtcgatcagcggaccttcggcggctggcagctcacc
gacctggtcgcggtggatgacagcgtggtgccgttgccggtggcgcatctggcccgtgac
ccgctggatccgcgcttcgacgccgagtcggtggtcaacgtgttgcggcgcaagcattcc
gaaatcaaacgccaactcctcgaccagaccgtggtgtccggcatcggcaacatctacgcc
gacgaggcgctgtggcgcgccgggattcgcggcacccggatggccgatgcgctgtcccgg
ccgcggttgcgggcgctgttggagtccgcgcgggcggtgatgagcgacgcgttggccgcc
ggtggcacctcgttcgattcgctctacgtcaacgtcaacggcgagtccggctacttcagc
cggtcgctggacgcctacggccgcgaagatgagccctgccggcgctgcgggacgctcata
cggcggcagaaattcaccaaccgctcgtcgtactactgcccgaagtgccagcgctga
DBGET
integrated database retrieval system
