Mycolicibacter sinensis: JDM601_2912
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Entry
JDM601_2912 CDS
T01512
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase II UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03420
Nucleotide excision repair
mjd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JDM601_2912 (uvrD2)
03430 Mismatch repair
JDM601_2912 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_2912 (uvrD2)
Enzymes [BR:
mjd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JDM601_2912 (uvrD2)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JDM601_2912 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
JDM601_2912 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH_5
Helicase_Sgs1
zf-Vps39_C
ORC-CDC6-like
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEF36912
UniProt:
F5Z124
LinkDB
All DBs
Position
complement(3114594..3116735)
Genome browser
AA seq
713 aa
AA seq
DB search
MDAMADPNGVPADGLIAGLDDEQRAAVLAPRGPVCVLAGAGTGKTRTITHRIAHLVAAGH
VAPGQVLAVTFTQRAAGEMRSRLRALGSAAGGEGGVGNGVGAVQALTFHAAARRQLRYFW
PRVVGETGWELLDRKFGVVARAAGHAGLRLSNDDVRDIAGEIEWAKASLIGPEQYPEAVA
AAGRDTPIDAAKLADVYAGYEALKARGEVAMLDFDDLLLHTAAAIENDAAVAAEFRDRYR
CFVVDEYQDVTPLQQRVLSAWLGERDDLTVVGDANQTIYSFTGASPRYLLDFTRRFPDAA
LVRLERDYRSTPEVVSLANRVIAAARGRVAGSKLKLVGQREPGPLPTFREHPDEVAEATA
VAKSIARLIDGGVAPAEIAVLYRVNAQSEVYEEALTEAGIAYQVRGGEGFFHRQEIRQAL
VALRRTAERGDDTGSALPETVRRVLEPLGLTAEPPSGVRARERWEALGALAELVDDEVAQ
RPDLDLPGLLAELRVRADSRHPPTVQGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHAL
AHGPDSEAVEEERRLLYVGVTRARVHLALSWALARAPGGRAGRKPSRFLHGIDGAVPQPD
PRAPARRRARGAPKHCRVCNKALGTPAAIMLSRCETCAADVDTELLVALKDWRLRTATEL
KVPAYIVFSDNTLTAIAEMLPADEAALVAIPGIGARKLEQFGSDVLELVRNRS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatggctgacccgaacggagttccggcggacgggctcatcgccggcctggac
gacgagcagcgcgccgccgtgttggctccccgcgggccggtgtgcgtgctggccggtgcc
ggaaccggcaagacccgcaccatcacccaccggatcgcgcacctggtcgcggccggtcac
gtcgcaccggggcaggtgctggcggtgacgttcacccagcgcgccgccggggagatgcgg
tcgcggctgcgcgcgctgggctcggccgcgggcggtgagggcggcgttggcaacggcgtg
ggggcggttcaggcgctgacattccacgccgccgcgcggcgccagctgcgctacttctgg
ccgcgggtggtcggcgagaccggttgggaactgctggaccgcaaattcggggtggtcgcc
cgggccgccggacatgccggactgcggctgtccaacgacgatgtccgcgacatcgcgggc
gagatcgagtgggccaaggcgtcgctgatcgggccggagcaatatccggaggcggtggcc
gccgccggccgcgacaccccgatcgacgccgcgaaactggccgatgtctacgccggctat
gaagcattgaaagcccgcggcgaagtggcgatgctcgacttcgacgacctgctgctgcac
accgccgccgccatcgagaacgatgcggcggtggccgccgaattccgggaccgttaccgc
tgcttcgtcgtcgacgaataccaggacgtcaccccgctgcagcaacgggtgctctcggcc
tggctgggcgagcgcgacgatctgaccgtggtcggcgacgccaatcagaccatctactcg
ttcaccggcgcctcgccgcgctacctgctcgacttcacccgccgcttcccggatgccgcc
ctggtgcgcctggagcgcgactaccggtccacaccggaggtggtgtcgctggccaaccgg
gtgatcgccgcggcccgcgggcgcgttgcgggcagcaaactcaagctggtcggccagcgc
gagcccggcccgctgccgacgtttcgggagcatcccgacgaggtcgccgaggcgaccgcg
gtggccaagtcgatcgcgaggctgatcgacggcggtgtcgcgccggcggagatcgccgtg
ctgtatcgggtcaacgcgcagtccgaggtgtatgaggaggcgctgaccgaggccggcatc
gcctaccaggttcgcgggggagagggcttcttccaccggcaggagatccggcaggcgctg
gtggccttgcggcggaccgccgagcgcggcgacgataccggctccgcgctcccggagacc
gtgcgccgggtgctcgaaccgctggggttgacggccgagccacccagtggcgtcagggcg
cgggagcgctgggaggccctcggtgcgctggccgaactggtcgacgacgaagtggcgcag
cgccccgacctggatctgcccggtctgctggccgaactgcgggtgcgtgccgactcgcgt
cacccgccgacggtgcagggcgtcacgctggcgtcgctgcacgccgccaaggggctggaa
tgggatgcggtgttcttggtggggctcgtcgacggcaccctgccgatctcgcacgccctt
gcccacggccccgacagtgaggccgtcgaggaggaacgccggctgctctacgtcggcgtc
acccgcgcccgggtgcacctggcgttgagctgggcgctggcccgcgcccccggcgggcgg
gccggccgcaagccgtcgcggtttctgcacggtatcgacggcgcggtgccccaacccgat
ccgcgggcacccgcgcgccgccgtgcccgcggggcgccgaaacattgccgggtctgcaac
aaggcgctgggcaccccggcggccatcatgctgagccggtgcgagacgtgcgcggccgat
gtcgacaccgagttgctggtggcgctcaaggattggcggctgcgcaccgccaccgagctc
aaagtgcccgcctacatcgtcttctccgacaacacgctcaccgccatcgccgagatgctg
cccgccgacgaggccgctctggtcgcgatcccgggcatcggcgcgcgcaagctggagcag
ttcggttccgacgtgctcgagctggtccgcaaccggagctga
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