Mycolicibacter sinensis: JDM601_3280
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Entry
JDM601_3280 CDS
T01512
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase (alpha chain) RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JDM601_3280 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjd03021
]
JDM601_3280 (rpoA)
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_3280 (rpoA)
Enzymes [BR:
mjd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JDM601_3280 (rpoA)
Transcription machinery [BR:
mjd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JDM601_3280 (rpoA)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JDM601_3280 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AEF37280
UniProt:
F5YXS6
LinkDB
All DBs
Position
complement(3494573..3495616)
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVVADNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSDEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELIVERGRGYVPAVQNKVSGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVLDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPASFDPSQVAGYDAATGTWSADTGYDEQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctcgcagcgtcccaccctgtccgaagaggtagtggccgacaaccgctcccag
ttcgtcatcgaaccgctggagccgggattcggttacaccctgggcaactcgcttcgccgc
acgctgctgtcgtcgatccccggcgcggcggtcaccagcatccgcatcgacggcgtgctg
cacgagttcacgacggtccccggcgtcaaagaggatgtcaccgacatcatcttgaacctc
aagggcctggtggtctcctccgacgaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggtgccgtcaccgccggtgacatcgtgccgccggcgggcgtgacggtgcacaac
cccgacatgcacatcgcgaccctcaacgacaagggcaagctcgaggtcgagttgatcgtc
gagcggggccgcggttacgtcccggccgtgcagaacaaggtctccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctggtgctggatgtggagaccaagaac
tccatcagcccgcgggacgcgctggcctcggccggcaagaccctggtcgaattgttcggc
ctggcacgcgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgaa
gcggaccacatcgcgtcgttcgcgctgccgatcgacgacctggatctgacggtgcggtcc
tacaactgcctcaagcgcgagggcgtgcacacggtcggggagctggtcgcccgcaccgag
tccgacctgctcgacatccgtaacttcgggcagaagtccatcgacgaggtcaaggtgaag
ctgcaccagctcggtctgtcgctcaaggacagcccggccagcttcgacccgtcgcaggtg
gcgggttacgacgccgccaccggcacctggtcggccgacaccggttacgacgagcaggac
tacgccgaaaccgaacagctgtag
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