Mycolicibacter sinensis: JDM601_3678
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Entry
JDM601_3678 CDS
T01512
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JDM601_3678 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjd03019
]
JDM601_3678 (recQ)
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_3678 (recQ)
Enzymes [BR:
mjd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JDM601_3678 (recQ)
Messenger RNA biogenesis [BR:
mjd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JDM601_3678 (recQ)
DNA repair and recombination proteins [BR:
mjd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JDM601_3678 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AEF37678
UniProt:
F5Z2B1
LinkDB
All DBs
Position
complement(3884617..3886713)
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AA seq
698 aa
AA seq
DB search
MTASTTPARAEAQAILEQLAGPHAVLRDDQWAAIEALVVERRRALVVQRTGWGKSAVYFI
AAKLLRARGHGPTVIVSPLLALMRNQVAAAERAGVHAATINSANVTEWADVQRRVTAGEL
DVLLVSPERLNNPDFRDEVLPALAARAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIADLG
AGVPVLATTATANDRVVEDVAGQLGVGGGDTLVLRGGLDRESLRLSVVAAGGPAQRAAWI
GEHLNELPGSGIVYTLTVAQAHDVAADLRAQGFAVAAYTGSTDSADREQLEADLLANRVK
ALIATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRSTASAEVILLPGTEDTDIW
RYFASLAFPPESLVRKVIGELSLDQPLSTPALEARVDLNRSRLEMVLKVLDVDGAVRRVK
GGWLGTGAQWTYDEPRYRKLDELRRGEQQAMLDYQRTDGCRMSFLRAQLNDPQLAEGERC
GRCDNCAGPRFDAEVDPTAAAATRERLMRPGVEITPRRQWPSGLAQLGVTLSGRISDGPE
PGRVIGRLTDLGWGARLRRLLDEPDREVPDDVVRAAVSVLAGWDWQTRPTAVLGLDSATH
PVLIGSLADRLAQLGRLTRLETLRYVPGRRATAAANSAYRVAALQGAWQPPTDLPADVGP
VLLVDDVTETGWTLTMAARVLRAAGAPQVLPFALASMN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcctcgaccacccccgcccgcgctgaagcccaggcgatcctggaacagctcgcc
ggcccgcacgcggtgttgcgcgatgatcagtgggccgcgatcgaggcgctggtggtcgag
cgccggcgcgcgctggtggtgcagcggaccggctggggcaaatcagcggtgtatttcatc
gcggccaaactgctgcgggcgcgcgggcacggcccgacggtgatcgtgtcgccgctgctg
gccctgatgcgcaatcaggtcgccgccgccgagcgggccggggtgcatgccgccaccatc
aattccgcgaatgtcaccgagtgggccgacgtgcaacgccgggtgacagccggtgagctg
gacgtgttgctggtcagcccggagcggctcaacaacccggacttccgcgacgaggtgctg
cccgcgctggcggcccgggccgggctggtggtggtcgacgaggcgcactgcgtctcggac
tgggggcacgatttccggccggactatcggcgcatccgcaccctgatcgccgaccttggg
gccggagtcccggtgctggcgaccacggcgaccgccaacgaccgggtggtcgaggacgtc
gccggccaactcggagtcggcggtggcgacacactggtgctgcgcggcggtctggaccgg
gagtcgctgcggttgtcggtggtggccgccggcggtccggcgcagcgcgccgcctggatc
ggcgaacacctgaacgagctgcccggctccgggatcgtctacacgctcaccgtggcccag
gctcacgacgtggccgccgatctgcgtgcgcaggggttcgcggtggcggcctataccggt
tcgaccgactccgccgaccgggagcaactcgaggccgacctgctggccaaccgggtcaag
gcgctgatcgccacgtcggcgttgggtatgggtttcgacaagccggacctcggattcgtg
gtgcacctgggtgcgccgtcgtcgccaatcgcctactaccagcaggtggggcgggccgga
cgttccaccgccagtgcggaggtcatcctgctgcccggcaccgaggacaccgacatctgg
cgctacttcgcctcgctggcgttcccgccggagtcgttggtgcgcaaggtgatcggcgag
ctgtcgctcgatcagccgctgtcgacgccggcgctggaggcccgggtcgacctgaatcgg
tcgcggttggagatggtgctcaaggttctcgacgtcgacggcgcggtacgccgggtcaag
ggcggctggctgggtaccggtgcgcagtggacctacgacgaaccgcgctaccgcaagctc
gacgagctgcgccgcggcgagcagcaggcgatgctggactaccagcgcaccgatggctgc
cggatgagttttctgcgcgcgcagctcaacgacccgcagctggccgaaggcgagcgttgc
gggcggtgcgacaactgcgccgggccgcggtttgacgccgaggtcgatcccaccgccgcc
gcggccacccgggagcggctgatgcgccccggcgtggagatcacgccacgccggcaatgg
ccgtctggactggcccagctcggtgtcacgctgtccggccggatcagcgacggtccggag
ccgggccgggtgatcggccggctcaccgacctgggctggggtgctcggctgcggcggctg
ctcgacgagccggaccgcgaggttcccgacgacgtggtgcgggcggccgtgtcggtgctg
gcgggctgggactggcagacccgacccaccgcggtactcgggctggattcggccacgcat
ccggtgctgatcggctcactggccgaccggctggcgcagctcggccgcctgacccggctg
gagacgctgcgctatgtgccgggccggcgggccacggcggcggcgaactcggcctatcgg
gtcgccgccctgcagggcgcctggcagccgcccaccgatctgccggccgatgtcggcccg
gtgttgctggtcgacgacgtgaccgagaccgggtggaccctgacgatggccgcccgggtg
ctgcgcgccgccggtgcgccgcaggtgctgccgttcgcgctggccagcatgaactga
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