Melaminivora jejuensis: LVC68_03130
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Entry
LVC68_03130 CDS
T07790
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mje
Melaminivora jejuensis
Brite
KEGG Orthology (KO) [BR:
mje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mje03016
]
LVC68_03130
Enzymes [BR:
mje01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LVC68_03130
Transfer RNA biogenesis [BR:
mje03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LVC68_03130
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
UHJ65533
LinkDB
All DBs
Position
667363..669447
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AA seq
694 aa
AA seq
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MHALFDEAGKFLAGRILSEAESSAQIELDSGKRVKVKTANILLRFDKPAPAELLAGARAL
AAEIELPLAWEFAPEDEFGFAELAREYFSAAAPPMEQAAMLLALFEAPHYFRRAGKGRFK
KASAEVVQQALAAIEKKRQLQEQIDAWAGELVAGRCPQPVLDQLYRILFKPDKNAPEYKA
VVEASRAAQLAPLALLSRAGAIQSSYQFHWQRFLFDFFPRGTGFAPLAAPEPPQELPLAD
VQAFSIDDSATTEIDDALSLTGLGSGTVRLGIHIAAPGLAIEPGGELDRVARTRLSTVYM
PGHKITMLPHEVVQRYTLDEGRANPAVSLYVSIDEATLAITGHETLLERVPVSVNLRHDQ
LDHIVTEDWLAHPEIQIENTPQALSDLREQLSFLHRLARQLKLQREEVRGKPETFSRPDY
SFRLHGVAGDEPDGSERVEISTRRRGAPLDLIVAEAAIVANSTWGELLADYGVPGIYRSQ
ASLAPGVKVRMSTRALPHAGIGVKSYAWATSPLRRYVDLVNQWQVIACARHGKTAALAAP
FKPKDAELFAIISSFEGTYSAYNAYQSSMERLWTLKYLQQNAIAELDATVIRDANAGGLL
LRADTLPLVLPALGPDSLTRGARVRVRLGEIDEISLDVHGTVLARLDDPLDASDDGPVDD
DEGEGEAVAGPIAIAVDVQEGDGAPAAPAAPASA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcactgtttgacgaagccggcaaattcctggccgggcgcatcctgtccgaggcc
gagtcctccgcacaaatcgagctggactcgggcaagcgggtcaaggtcaagaccgccaac
atcctgctcaggttcgacaagccggcccccgccgagctgctggccggcgcgcgcgcgctg
gccgccgagatcgagctgccgctggcctgggagttcgcccccgaggacgaattcggcttt
gccgaactggcgcgcgagtatttctccgccgccgcgccgcccatggagcaggccgccatg
ctgctggcgctgttcgaggcgccgcattactttcgccgcgccggcaagggccgcttcaaa
aaggctagcgccgaggtcgtgcagcaggcgctggcggccatcgagaaaaagcgccagctg
caagagcagatcgacgcctgggccggcgagctggtggcgggccgctgcccacagcccgtg
ctcgatcagctctaccggatactgttcaagcccgacaagaatgcgcccgagtacaaggcc
gtggtcgaggccagccgcgccgcgcagctggcgccgctggcgctgctctcgcgcgccggc
gccatccagtcgagctaccagttccactggcagcgctttctgttcgatttcttcccgcgc
ggcacgggctttgccccgctggccgcgcccgagccgccgcaggagctgccgctggccgac
gtgcaggccttctccatcgacgactcggccaccaccgagatcgacgacgccctgtcgctc
accggcctgggcagcggcacggtgcgcctgggcatccacatcgccgcgcccggcctggcc
atcgagcccggcggcgagttggatcgcgtggcgcgcacccgcctgtccacggtctatatg
ccgggccacaagatcaccatgctgccgcatgaggtggtgcagcgctacaccctggacgag
ggccgcgccaacccggcggtgtcgctgtacgtgagcatcgacgaggccacgctggccatc
accggccacgaaaccctgctcgaacgcgtgccagtcagcgtcaacctgcgccacgaccag
ctcgatcacatcgtcaccgaggactggctggcccacccagaaattcagatagaaaacacg
ccgcaagccttgtctgacttgcgcgaacagctatcatttttacaccgactggcgcgccag
ctcaagctgcagcgcgaggaggtgcgcggcaagcccgagaccttcagccggcccgactac
agcttccgcctgcacggcgtggccggcgacgagcccgacggcagcgagcgcgtcgagatc
agcacgcgccggcgcggcgcgccgctggacttgatcgtggccgaggccgccatcgtcgcc
aacagcacctggggcgagttgctggccgactacggcgtgcccggcatctaccgcagccag
gccagtctggcgcccggcgtcaaggtgcgcatgtccacgcgcgccctgccgcacgccggc
atcggcgtgaagagctacgcctgggccacctcgccgctgcgccgctacgtcgatctggtc
aaccagtggcaggtcatcgcctgcgcgcgccacggcaagaccgccgcgctggccgcgccc
ttcaagcccaaggatgccgagctgttcgccatcatcagcagcttcgagggcacctacagc
gcctacaacgcctaccaaagcagcatggagcggctgtggacgctcaagtacctgcagcaa
aacgccatcgccgagctggacgccaccgtgatccgcgatgccaatgccggcggcctgctg
ctgcgcgccgacaccttgccgctggtgctgccggcgctcggcccggacagcctgacgcgc
ggcgcgcgcgtgcgcgtgcgcctgggcgagatcgacgagatcagcctggacgtgcatggc
acggtgctggcgcgcctggacgatccgctggacgccagcgacgacggcccggtggatgac
gacgagggcgagggcgaagccgtggccggccccatcgccattgccgtcgatgtgcaggag
ggcgacggcgcgccagcggctccggctgcgcccgcgtcggcatga
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