Melaminivora jejuensis: LVC68_06975
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Entry
LVC68_06975 CDS
T07790
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mje
Melaminivora jejuensis
Pathway
mje03030
DNA replication
mje03430
Mismatch repair
mje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVC68_06975 (dnaE)
03430 Mismatch repair
LVC68_06975 (dnaE)
03440 Homologous recombination
LVC68_06975 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mje03032
]
LVC68_06975 (dnaE)
03400 DNA repair and recombination proteins [BR:
mje03400
]
LVC68_06975 (dnaE)
Enzymes [BR:
mje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVC68_06975 (dnaE)
DNA replication proteins [BR:
mje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVC68_06975 (dnaE)
DNA repair and recombination proteins [BR:
mje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVC68_06975 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UHJ66247
LinkDB
All DBs
Position
1499673..1503221
Genome browser
AA seq
1182 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTIRIGEAMRAAARDAQPALAITDLNNLFGAVKFYREGRSKGVKP
IIGVEVMLEGDTGPAPARLLLLAQNRQGYLNLCELLARAWTGNVVKNLPLCTWAWLQELN
AGLIALSGAQAGPVGQALMKGADDVAQELAQRLAQIYPQRFYLELQRAGRPDDEAHVAAA
AQLAARLGLPVVATHPIQFATPDDHEAHEARVCIAEGEILANPRRVRRFTREQHFKSAAQ
MHELFADLPSALANSVEIARRCSLTLVLGKPQLPDFPTPGGMPIDEYFRLASHEGLKERL
AQLYPDAAERERQRPRYEERLEFELGTILKMGFPGYFLIVGDFIQWAKANGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQSNRDRVIEYVKDKYGR
QAVSQIATFGTMAAKAAIRDVGRVMDLSYNFCDGISKLVPGKPGQTYTLAYPPEPRKEGD
KNNYALELEPLLYERVRSEEDVRTVIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIARELIQQRHKGQENFAFEQVPL
DDARTYRLFSEGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKPE
EMAEHRIIFRKGAAEKGIPEAQADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFYCANMTVEMDDTDKLKVLYEDAVKHFGIRFEPPDINRGLYRFEPVTDQVIRYGLGA
VKGTGQQAIEAIIAAREGRGTGPQGDVCGPFKSLFDFCVRVDRTRLNKRTVEALIKAGAF
DAVEPNRAALVASIDRAFDYAAAQLANANQGGLFDMMGEDAIGASTEEPALADVPEWGVK
ERLTQEKTAVGFYLSGHLFDEVEAEVRRFVRTPIAELADSREPQLMAGILSDCRVINGQR
GKLALFKLDDRSGAIEASADEAVIAASAGLLRDDEFVVASGRLQLDHFSGGLRLKVQQLW
SLAGARARFGRYLHVDSSVQPDVAAIVRAYPPQREESGQGEPLLHGLRVRLAVRCSDPAG
GAPALAELQLGDASRFFPCDQALAAWAQQVGAGSLSVIYEMA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccacttgcgcctgcacaccgaattttccgtcgttgacggcaccatccgcatc
ggcgaggccatgcgcgcggcggcccgcgacgcccagccggccctggcgatcactgatctg
aacaacctgtttggcgccgtcaagttctaccgcgagggccgcagcaaaggagtcaagccc
atcatcggcgtcgaggtcatgctcgaaggcgacaccggcccggccccggcacgcctgctg
ctgctggcacagaatcgccagggctacctgaacctgtgcgaactgctggcccgggcctgg
acaggcaacgtggtcaagaatctgccgctgtgtacctgggcgtggctgcaagagttgaac
gctggcctgatcgccctgtccggcgcgcaggccggcccggttggccaggcgctgatgaag
ggtgccgacgacgtcgcccaggagctggcgcagcgcctggcgcagatctatccgcagcgc
ttttacctggagctgcagcgcgcaggccggcccgacgatgaggcgcatgtcgccgctgct
gcgcaactggccgcccggctgggcctgccggtggtcgccacgcaccccatccagttcgcc
acgccggacgaccatgaggcgcacgaggcgcgtgtgtgcatcgccgagggcgaaatcctg
gccaatccgcgccgggtgcgccgcttcacgcgcgagcagcatttcaagagcgctgcgcag
atgcacgagctctttgccgacctgccttcggcgttggccaatagtgtcgagatcgcccgc
cgctgcagcctgacgctggtgctgggcaagccgcaattgccggacttcccgacgccgggc
ggtatgcccatcgacgagtacttccgcctggcctcgcacgagggcctgaaggagcgcttg
gcgcagctgtaccccgatgctgccgagcgcgagcgccagcgcccacgctacgaggagcgc
ctggagttcgagctgggcaccatcctgaagatgggcttcccgggctacttcctgatcgtg
ggcgacttcatccagtgggccaaggccaatggttgcccggtggggccgggccggggttcg
ggggctggctcgctggtggcctatgcgctcaagatcaccgacctcgatccgctgcagtac
aacctgctgttcgagcgtttcctgaacccggagcgggtgtccatgcccgacttcgacatc
gatttctgccaatccaaccgcgaccgggtcatcgaatacgtcaaggacaagtatggccgg
caggccgtcagccagatcgccaccttcggcaccatggcggccaaggcggcgatccgcgac
gtgggccgggtcatggatctgagctacaacttctgcgacggcatctccaagctggtgccc
ggcaagcccggccagacctacaccctggcctatccgcccgagccgaggaaggagggtgac
aagaacaactacgccctggagctggagccgctgctgtacgagcgcgtgcgcagcgaggag
gacgtgcgcaccgtgatcgagatggcgcaaaagctcgaaggcatgacgcgcaacatcggc
atgcacgccggcggcgtgctgatcgcgccgggcaaattgacggatttttgcccgctgtac
caacagccgggcagcgagtcggcagtcagccagtacgacaaggatgacgtggaggccatc
ggcctggtcaagttcgacttcctgggcctggccacgctgaccatcctggagattgcccgc
gagctgatccagcagcgccacaagggccaggagaatttcgccttcgagcaagtgccgctc
gatgatgcgcgcacctaccggctgttttccgagggcaagaccgaggccgtgttccagttc
gaaagccgcggaatgcagggcatgttgaaggaagcccgccccagccggctggaagacctg
atcgccctcaacgccctgtaccgccccgggccgatggatctgatccccagcttcgtgaac
cgcaagcacggcaaggaggtggtcgagtacccgcacccgctggtcgaaccggtgctggcc
gaaacctacggcatcatggtctatcaggagcaggtcatgcagactgcgcaggtgctgggt
ggctactcgctgggcggcgccgacatgctgcgccgtgccatgggcaagaaaaagcccgag
gagatggccgagcaccgcatcatcttcaggaagggcgctgccgagaaaggcatccccgag
gcccaggccgacgaggtcttcgacctgatggaaaagttcgccggctatggcttcaacaag
tcgcacgccgccgcctactcgctgctggcctatcacaccggctggctcaaggtgcattac
acggccgagttctactgcgccaacatgaccgtggagatggacgacacggacaagctcaag
gtgctgtacgaggatgccgtcaagcatttcggcatccgcttcgagccgccggacatcaac
cgggggctgtaccgcttcgagccggtgacggatcaggtcatccgctacggcctgggcgcc
gtcaagggcacgggccaacaggctatcgaggccatcattgctgcgcgcgagggccggggc
acggggccgcagggcgacgtgtgcgggccgttcaagagcctgttcgatttttgcgtgcgc
gtcgatcgcacgcgcctgaacaagcgcaccgtggaggcgctgatcaaggccggcgccttc
gatgccgtcgagccgaaccgggcggcgctggtggcgtccatcgaccgggccttcgactac
gccgccgcgcaactggccaacgccaaccagggcgggctgttcgacatgatgggcgaggac
gccatcggcgccagcaccgaggagccggccctggccgatgtgcccgagtggggcgtcaag
gagcggctgacgcaggaaaagaccgccgtgggcttttacctgtcgggccacctgttcgac
gaggtcgaggccgaggtgcgccgcttcgtgcgcacacccatcgccgagctggccgacagc
cgcgagccccagctcatggccggcatcctgagcgactgccgcgtcatcaatggccagcgc
ggcaagctggcgctgttcaagctggatgacagatcgggcgctatcgaggcctcggccgac
gaggccgtgatcgctgccagcgccggtctgctgcgcgatgatgagttcgtggtcgccagc
ggtcggctgcagctggatcacttcagcggcggcctgcgcctgaaggtgcagcagttgtgg
agcctggccggcgcgcgcgcgcgctttggtcgctatctgcacgtggacagcagcgtgcag
ccggacgtggcggccatcgtgcgcgcctacccgccgcagcgcgaggagagcggacagggc
gagccgctgctgcatggcctgcgcgtgcgcctggccgtgcgctgcagcgacccagcgggc
ggcgcaccggcgctggccgagctgcagctgggcgacgccagccgcttctttccctgcgac
caggctctggccgcgtgggcgcagcaagtcggcgccggcagcctcagcgtgatctacgag
atggcgtga
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