Melaminivora jejuensis: LVC68_08900
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Entry
LVC68_08900 CDS
T07790
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mje
Melaminivora jejuensis
Pathway
mje03420
Nucleotide excision repair
mje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVC68_08900
03430 Mismatch repair
LVC68_08900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mje03400
]
LVC68_08900
Enzymes [BR:
mje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVC68_08900
DNA repair and recombination proteins [BR:
mje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVC68_08900
MMR (mismatch excision repair)
Other MMR factors
LVC68_08900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_22
AAA_16
UvrD_C_2
UvrD_C
SLFN-g3_helicase
DEAD
AAA_30
nSTAND3
AAA_11
ATPase
NACHT
NTPase_1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UHJ63564
LinkDB
All DBs
Position
complement(1914460..1916220)
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AA seq
586 aa
AA seq
DB search
MNEPCPLRDSVLVCEGHALVTGGPGSGKTTIALRKAVKRIQQGMTPGQSALFLSFSRAAV
ARILDAAKLEATAAEQEQLSIQTFHSFFWDILKAHAYLLGAPRKLSILLPQDEKALNGGI
DDEDDEWDQWLIERERLFREEGRIAFDLFAPNATRLLATSSHLLSSLARRHPIIIVDEAQ
DTGQFAWQCVEMLAPHAQIVCLADLEQQIFDYLPGVGPERIAAIRSALHPLEVDLGTQNH
RSPDSEILIFANDILAGQARGAPYKGISSFSYRPENPTPNWNHVLRRAIAQLLSKIRAES
DSRPQTLAILVSNNRSALRMSNALNAIEPNVGKAVRHRLLFDEAEALLSARFAAFLLEPK
DLAQLELDVAASMELIAAARRATGQAKAAVSKLLEQAGKIRGGKTLNINIVKALRRLISG
LHADGFTGDPATDWLTVKYALRATGQNELLRVASQLDFLVAFRRGHRISAGLANEWLRDG
AYTNARLALDQALAQEQILDGIEAPAGLQVMNFHKAKGKQFDGVVIVREARRTAAGVQSS
FVWRGDEAPHPKSRKVLRVGITRARIHTLIVNPMWPACPILRGHKL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagccttgcccgcttcgtgacagtgtccttgtttgcgaagggcacgcgctggtg
actggtggccctggaagcggtaagacgaccattgcattgcgaaaggcggtcaagcgtatt
caacagggaatgacgcctgggcaatccgctctcttcttgagcttctcgcgcgcggcagtg
gcgcgcatcctcgacgcggccaagctagaagctacagcagccgagcaagaacaactttcc
attcagaccttccactccttcttctgggacatcctcaaggcgcacgcgtacctgctcggt
gctccgcgcaaactgtcgattttgctgccgcaggatgaaaaggctctgaacgggggcatc
gacgacgaggacgacgaatgggatcaatggctgattgagcgcgagcggctgttccgcgaa
gagggccgcatcgcgttcgacctgttcgctcccaacgctactcgtctgctcgccactagc
agccatttgctttcgtcgctcgcgcgacggcatcccatcatcatcgttgacgaggcccag
gacaccgggcaattcgcgtggcaatgcgttgaaatgcttgctccacacgcgcagatcgtt
tgcctcgctgacctcgaacaacaaatcttcgattacctgcctggcgttggaccagagcgg
atcgcagcgattcgctctgcacttcatccactcgaagtcgatctgggcactcagaaccat
cgcagcccagactctgaaatattgatctttgccaacgacattctggccgggcaggcacgc
ggtgcgccctataaagggatttcttccttttcctatcggccagaaaacccaacgccgaac
tggaaccatgtgctacgacgcgccatagctcagttgctatcgaaaatccgcgcggagtcc
gatagccgaccccaaacgctcgcaatattggtgtcaaacaacagaagtgcgctacgcatg
tccaacgcgctcaacgcaatcgaaccgaatgtaggcaaggctgtgcgccacaggctgttg
ttcgacgaggccgaggccctactatcggcacgatttgcggcgtttctgcttgagcccaaa
gaccttgctcagctcgagctcgatgtggcagccagcatggagctgatcgccgctgcgcgg
cgggcgaccggacaagctaaggccgccgtgagcaaacttttggagcaggcgggaaaaatt
cgaggcggcaagaccctcaacatcaacatcgtgaaagcgttgcggaggctaatttcaggt
cttcacgccgacggcttcaccggagaccccgccaccgactggcttaccgtcaaatacgct
cttcgagccactggccaaaatgagttgctgcgtgtggcttcccagcttgacttcctagtc
gccttccgacgcggacatcgaatttcagcaggcttagccaacgaatggctgcgcgacggt
gcctacacgaacgctcggttagcgttagatcaggcccttgcacaagagcaaattttggat
ggtatcgaggctcctgccgggctccaggtgatgaactttcataaggccaagggtaagcag
ttcgatggagttgtcattgtccgagaagcacggcgcacggctgccggagtacagtcttcc
ttcgtttggcgaggagatgaggcaccacatcctaaaagccgcaaagtcctgcgtgtgggg
atcacccgtgctcgtatccacacattgatcgtcaatcccatgtggccggcctgtccaatc
ctgcgaggacataagttgtag
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