Melaminivora jejuensis: LVC68_13425
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Entry
LVC68_13425 CDS
T07790
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mje
Melaminivora jejuensis
Pathway
mje03410
Base excision repair
mje03430
Mismatch repair
mje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVC68_13425 (recJ)
03430 Mismatch repair
LVC68_13425 (recJ)
03440 Homologous recombination
LVC68_13425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mje03400
]
LVC68_13425 (recJ)
DNA repair and recombination proteins [BR:
mje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LVC68_13425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LVC68_13425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LVC68_13425 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UHJ64341
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Position
2883898..2885613
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AA seq
571 aa
AA seq
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MKIIVRDIHPRAAWTLEQTGIHPLLARLYAARGVSSKEELDDGLAHLLRPQQLRGIDSAA
RVLADAMAAGQRLLIVADYDCDGATACAVAVRGLRLLGAAHVDYLVPDRVVDGYGLTPPI
ARRVHERGADVLITVDNGIASCAGVAEARALGLAVVVTDHHLPGPELPEADAIVNPNQPG
CTFESKHMAGVGVMFYVLLALRAELRARGVFDAASQPRLEPLLPLVALGTVADVVRLDSN
NRRLVAQGLKRIRAGQMQPGIRALFAAAGRKPEVATTFDFGFALGPRINAAGRLADMTLG
IECLLTEDASRADELARQLDAINRERRELEGGMREQALILAEQLFEEGDAPPPAISVFDA
DFHEGVVGIVASRLKDIHHRPTFVFAASAAPGREHELKGSGRSIPGFHLRDALDLVAKRH
PGVILKFGGHAMAAGCTVAEEHFETFERAFAEVAREWLDAATLTRRLETDGPLAPEWRRP
DLVDALAREVWGQGFAPPTFSEKLAVVNQRLVGDGGKHLSLKLLHHGQPVDGIWFGRTEL
LPREALLAFRLDVNEWGGQRRVQFVVEGTEE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatagtacgagatatccacccccgcgcagcctggacgctggagcagaccggc
atccacccgctgctggcgcgcctgtatgcagcacgcggcgtatccagcaaggaagagctc
gacgacggcctggcccacctgctgcgcccgcagcagctgcgcggcatcgacagcgcggcg
cgcgtgctggccgacgccatggccgccggccagcgcctgctgatcgtggccgactacgac
tgcgacggcgccaccgcctgcgccgtggccgtacgcggtctgcgcctgctgggcgccgcg
cacgtggactacctggtgcccgaccgcgtggtcgatggctacggcctcacgccccccatt
gcccggcgcgtacacgagcgcggcgccgacgtcttgatcaccgtggacaacggcatcgcc
agctgcgccggcgtggccgaggcccgcgcgctgggcctggccgtggtcgtgaccgaccac
cacctgcccggccccgagctgcccgaggccgacgccatcgtcaaccccaaccagcccggc
tgcacattcgagagcaagcacatggccggcgtgggcgtcatgttctacgtgctgctggcg
ctgcgcgccgagctgcgcgcacgcggcgtattcgacgccgccagccagccgcgcctggag
ccgctgctgcccctggtcgccctgggcacggtggccgacgtggtgcgcctggacagcaac
aaccgccgcttggtggcgcagggcttgaagcgcatccgcgccgggcagatgcagccgggc
atccgggcgctgttcgccgccgccgggcgcaagcccgaggtggccaccaccttcgacttc
ggcttcgccctgggcccgcgcatcaacgccgccgggcgcctggccgacatgacgctgggc
atcgaatgcctgctgaccgaggacgccagccgcgccgacgagctggcgcgccagctcgac
gccatcaaccgcgagcgccgcgagctggagggcgggatgcgcgagcaggccctgatcctg
gccgagcagctgttcgaggagggcgacgcgccgccgccggccatcagcgtgttcgatgcg
gatttccatgagggcgtggtcggcatcgtcgcctcgcgcctgaaggacatccaccaccgc
ccgaccttcgtcttcgccgccagcgccgcgccgggcagggagcacgagctcaagggctcg
ggccgctccatccccggttttcacctgcgcgatgcgctcgatctggtggccaagcgccat
cccggcgtgatcctgaagttcggcggccacgccatggccgccggctgcaccgtggccgag
gagcacttcgagaccttcgagcgcgcctttgccgaagtggcgcgcgagtggctggacgcc
gccacgctcacgcgccggctggagaccgacggcccgctggcgcccgaatggcgccgcccg
gatctggtcgatgcgctggcgcgcgaagtctggggccagggctttgccccgcccaccttc
agcgaaaaactggccgtcgtgaaccagcgcctggtgggcgacggcggcaagcacctgtcg
ctcaagctgctgcaccacggccagccggtggacggcatctggttcggccgcaccgagctg
ctgccgcgcgaggcgctgctggccttccggctggatgtcaacgaatggggcggccagcgg
cgcgtgcagttcgtggtggaggggacggaggagtaa
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